Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.75□□□□□ -0.05
SSU72Q9NP77 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SSU72Q9NP77 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.75□□□□□ -0.05
SSU72Q9NP77 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC14.75□□□□□ -0.05
SSU72Q9NP77 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SSU72Q9NP77 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
SSU72Q9NP77 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SSU72Q9NP77 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.75□□□□□ -0.05
SSU72Q9NP77 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SSU72Q9NP77 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SSU72Q9NP77 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SSU72Q9NP77 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SSU72Q9NP77 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC14.75□□□□□ -0.05
SSU72Q9NP77 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.75□□□□□ -0.05
SSU72Q9NP77 AL157996.1-201ENST00000624684 2299 ntBASIC14.75□□□□□ -0.05
SSU72Q9NP77 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
SSU72Q9NP77 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
SSU72Q9NP77 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SSU72Q9NP77 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
SSU72Q9NP77 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SSU72Q9NP77 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SSU72Q9NP77 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.75□□□□□ -0.05
SSU72Q9NP77 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.75□□□□□ -0.05
SSU72Q9NP77 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SSU72Q9NP77 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.75□□□□□ -0.05
SSU72Q9NP77 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.75□□□□□ -0.05
SSU72Q9NP77 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.75□□□□□ -0.05
SSU72Q9NP77 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC14.75□□□□□ -0.05
SSU72Q9NP77 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.75□□□□□ -0.05
SSU72Q9NP77 AC138761.1-201ENST00000584393 385 ntBASIC14.75□□□□□ -0.05
SSU72Q9NP77 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.75□□□□□ -0.05
SSU72Q9NP77 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.75□□□□□ -0.05
SSU72Q9NP77 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
SSU72Q9NP77 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.75□□□□□ -0.05
SSU72Q9NP77 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.75□□□□□ -0.05
SSU72Q9NP77 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC14.75□□□□□ -0.05
SSU72Q9NP77 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SSU72Q9NP77 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SSU72Q9NP77 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC14.75□□□□□ -0.05
SSU72Q9NP77 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SSU72Q9NP77 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SSU72Q9NP77 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SSU72Q9NP77 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SSU72Q9NP77 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
SSU72Q9NP77 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
SSU72Q9NP77 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SSU72Q9NP77 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SSU72Q9NP77 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SSU72Q9NP77 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SSU72Q9NP77 KHSRPP1-201ENST00000427983 1768 ntBASIC14.75□□□□□ -0.05
SSU72Q9NP77 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SSU72Q9NP77 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
SSU72Q9NP77 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SSU72Q9NP77 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SSU72Q9NP77 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SSU72Q9NP77 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
SSU72Q9NP77 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
SSU72Q9NP77 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
SSU72Q9NP77 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
SSU72Q9NP77 ST20-AS1-201ENST00000560255 4223 ntBASIC14.74□□□□□ -0.05
SSU72Q9NP77 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.74□□□□□ -0.05
SSU72Q9NP77 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSU72Q9NP77 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.74□□□□□ -0.05
SSU72Q9NP77 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
SSU72Q9NP77 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC14.74□□□□□ -0.05
SSU72Q9NP77 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSU72Q9NP77 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSU72Q9NP77 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.74□□□□□ -0.05
SSU72Q9NP77 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSU72Q9NP77 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.74□□□□□ -0.05
SSU72Q9NP77 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSU72Q9NP77 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSU72Q9NP77 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SSU72Q9NP77 AL138725.1-201ENST00000407347 1314 ntBASIC14.74□□□□□ -0.05
SSU72Q9NP77 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSU72Q9NP77 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC14.74□□□□□ -0.05
SSU72Q9NP77 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
SSU72Q9NP77 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SSU72Q9NP77 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.74□□□□□ -0.05
SSU72Q9NP77 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSU72Q9NP77 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SSU72Q9NP77 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
SSU72Q9NP77 MIR574-201ENST00000385209 96 ntBASIC14.74□□□□□ -0.05
SSU72Q9NP77 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.74□□□□□ -0.05
SSU72Q9NP77 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.74□□□□□ -0.05
SSU72Q9NP77 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.74□□□□□ -0.05
SSU72Q9NP77 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SSU72Q9NP77 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SSU72Q9NP77 FAM86LP-201ENST00000478302 853 ntBASIC14.74□□□□□ -0.05
SSU72Q9NP77 GCOM2-201ENST00000509133 1104 ntBASIC14.74□□□□□ -0.05
SSU72Q9NP77 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.74□□□□□ -0.05
SSU72Q9NP77 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.74□□□□□ -0.05
SSU72Q9NP77 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.74□□□□□ -0.05
SSU72Q9NP77 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSU72Q9NP77 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.74□□□□□ -0.05
SSU72Q9NP77 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.74□□□□□ -0.05
SSU72Q9NP77 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.74□□□□□ -0.05
SSU72Q9NP77 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSU72Q9NP77 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.74□□□□□ -0.05
SSU72Q9NP77 AL049840.4-201ENST00000602422 811 ntBASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms