Protein–RNA interactions for Protein: Q9BW85

CCDC94, Coiled-coil domain-containing protein 94, humanhuman

Predicted RBP Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC94Q9BW85 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC94Q9BW85 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC94Q9BW85 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC94Q9BW85 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.97■□□□□ 0.31
CCDC94Q9BW85 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
CCDC94Q9BW85 AL162726.2-201ENST00000438986 1017 ntBASIC16.97■□□□□ 0.31
CCDC94Q9BW85 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC94Q9BW85 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.97■□□□□ 0.31
CCDC94Q9BW85 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC94Q9BW85 AL359711.2-201ENST00000563105 872 ntBASIC16.97■□□□□ 0.31
CCDC94Q9BW85 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC16.97■□□□□ 0.31
CCDC94Q9BW85 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.97■□□□□ 0.31
CCDC94Q9BW85 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC94Q9BW85 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC94Q9BW85 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.97■□□□□ 0.31
CCDC94Q9BW85 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.97■□□□□ 0.31
CCDC94Q9BW85 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.97■□□□□ 0.31
CCDC94Q9BW85 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC94Q9BW85 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC94Q9BW85 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
CCDC94Q9BW85 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC94Q9BW85 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC94Q9BW85 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC94Q9BW85 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC94Q9BW85 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC94Q9BW85 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC94Q9BW85 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC94Q9BW85 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC94Q9BW85 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC94Q9BW85 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC94Q9BW85 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC94Q9BW85 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CCDC94Q9BW85 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC94Q9BW85 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC94Q9BW85 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC94Q9BW85 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC94Q9BW85 AC019294.4-201ENST00000561777 2905 ntBASIC16.97■□□□□ 0.31
CCDC94Q9BW85 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC94Q9BW85 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
CCDC94Q9BW85 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
CCDC94Q9BW85 AC097359.2-201ENST00000604992 2389 ntBASIC16.96■□□□□ 0.31
CCDC94Q9BW85 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC94Q9BW85 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC94Q9BW85 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC94Q9BW85 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC94Q9BW85 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC94Q9BW85 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC94Q9BW85 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.96■□□□□ 0.31
CCDC94Q9BW85 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC94Q9BW85 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC94Q9BW85 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC94Q9BW85 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC94Q9BW85 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC94Q9BW85 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC94Q9BW85 SOCS2P1-201ENST00000417727 557 ntBASIC16.96■□□□□ 0.31
CCDC94Q9BW85 TTTY23B-201ENST00000442790 549 ntBASIC16.96■□□□□ 0.31
CCDC94Q9BW85 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.96■□□□□ 0.31
CCDC94Q9BW85 AC007389.4-201ENST00000454674 793 ntBASIC16.96■□□□□ 0.31
CCDC94Q9BW85 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.96■□□□□ 0.31
CCDC94Q9BW85 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC94Q9BW85 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.96■□□□□ 0.31
CCDC94Q9BW85 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC94Q9BW85 AC120045.2-201ENST00000567334 178 ntBASIC16.96■□□□□ 0.31
CCDC94Q9BW85 PIGL-212ENST00000581006 554 ntTSL 4 BASIC16.96■□□□□ 0.31
CCDC94Q9BW85 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.96■□□□□ 0.31
CCDC94Q9BW85 CU634019.7-201ENST00000624153 1185 ntBASIC16.96■□□□□ 0.31
CCDC94Q9BW85 FP236241.2-201ENST00000624906 1185 ntBASIC16.96■□□□□ 0.31
CCDC94Q9BW85 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC94Q9BW85 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CCDC94Q9BW85 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC94Q9BW85 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC94Q9BW85 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC16.96■□□□□ 0.31
CCDC94Q9BW85 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC94Q9BW85 CICP16-201ENST00000502609 2813 ntBASIC16.96■□□□□ 0.3
CCDC94Q9BW85 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC16.96■□□□□ 0.3
CCDC94Q9BW85 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CCDC94Q9BW85 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CCDC94Q9BW85 SLC9A3P3-201ENST00000457608 2229 ntBASIC16.96■□□□□ 0.3
CCDC94Q9BW85 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CCDC94Q9BW85 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CCDC94Q9BW85 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.96■□□□□ 0.3
CCDC94Q9BW85 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.96■□□□□ 0.3
CCDC94Q9BW85 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC16.96■□□□□ 0.3
CCDC94Q9BW85 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CCDC94Q9BW85 INTS4P1-203ENST00000641008 3683 ntBASIC16.95■□□□□ 0.3
CCDC94Q9BW85 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC94Q9BW85 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC94Q9BW85 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC94Q9BW85 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC94Q9BW85 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC94Q9BW85 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC94Q9BW85 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC94Q9BW85 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC94Q9BW85 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CCDC94Q9BW85 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC94Q9BW85 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.95■□□□□ 0.3
CCDC94Q9BW85 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC94Q9BW85 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CCDC94Q9BW85 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC94Q9BW85 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms