Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.41□□□□□ -0.26
TRAF4Q9BUZ4 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.41□□□□□ -0.26
TRAF4Q9BUZ4 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13.41□□□□□ -0.26
TRAF4Q9BUZ4 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
TRAF4Q9BUZ4 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC13.41□□□□□ -0.26
TRAF4Q9BUZ4 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.41□□□□□ -0.26
TRAF4Q9BUZ4 APRT-204ENST00000563655 709 ntTSL 5 BASIC13.41□□□□□ -0.26
TRAF4Q9BUZ4 AC120045.2-201ENST00000567334 178 ntBASIC13.41□□□□□ -0.26
TRAF4Q9BUZ4 AC097359.3-201ENST00000603982 1210 ntBASIC13.41□□□□□ -0.26
TRAF4Q9BUZ4 AL022328.1-201ENST00000610050 478 ntBASIC13.41□□□□□ -0.26
TRAF4Q9BUZ4 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRAF4Q9BUZ4 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAF4Q9BUZ4 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAF4Q9BUZ4 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
TRAF4Q9BUZ4 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC13.41□□□□□ -0.26
TRAF4Q9BUZ4 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRAF4Q9BUZ4 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
TRAF4Q9BUZ4 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAF4Q9BUZ4 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAF4Q9BUZ4 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.41□□□□□ -0.26
TRAF4Q9BUZ4 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAF4Q9BUZ4 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAF4Q9BUZ4 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAF4Q9BUZ4 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC13.41□□□□□ -0.26
TRAF4Q9BUZ4 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.41□□□□□ -0.26
TRAF4Q9BUZ4 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAF4Q9BUZ4 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC13.41□□□□□ -0.26
TRAF4Q9BUZ4 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.41□□□□□ -0.26
TRAF4Q9BUZ4 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAF4Q9BUZ4 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAF4Q9BUZ4 AC131902.2-201ENST00000566892 2172 ntBASIC13.41□□□□□ -0.26
TRAF4Q9BUZ4 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAF4Q9BUZ4 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAF4Q9BUZ4 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRAF4Q9BUZ4 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAF4Q9BUZ4 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRAF4Q9BUZ4 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
TRAF4Q9BUZ4 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.4□□□□□ -0.26
TRAF4Q9BUZ4 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAF4Q9BUZ4 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAF4Q9BUZ4 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAF4Q9BUZ4 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAF4Q9BUZ4 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAF4Q9BUZ4 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAF4Q9BUZ4 AC015802.1-201ENST00000588104 1449 ntBASIC13.4□□□□□ -0.26
TRAF4Q9BUZ4 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAF4Q9BUZ4 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
TRAF4Q9BUZ4 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAF4Q9BUZ4 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAF4Q9BUZ4 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
TRAF4Q9BUZ4 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.4□□□□□ -0.26
TRAF4Q9BUZ4 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.4□□□□□ -0.26
TRAF4Q9BUZ4 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAF4Q9BUZ4 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC13.4□□□□□ -0.26
TRAF4Q9BUZ4 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.4□□□□□ -0.26
TRAF4Q9BUZ4 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAF4Q9BUZ4 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
TRAF4Q9BUZ4 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAF4Q9BUZ4 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
TRAF4Q9BUZ4 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAF4Q9BUZ4 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAF4Q9BUZ4 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.4□□□□□ -0.26
TRAF4Q9BUZ4 C1QBPP1-201ENST00000400117 770 ntBASIC13.4□□□□□ -0.26
TRAF4Q9BUZ4 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC13.4□□□□□ -0.26
TRAF4Q9BUZ4 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC13.4□□□□□ -0.26
TRAF4Q9BUZ4 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAF4Q9BUZ4 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC13.4□□□□□ -0.26
TRAF4Q9BUZ4 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.4□□□□□ -0.26
TRAF4Q9BUZ4 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAF4Q9BUZ4 PTP4A1P2-201ENST00000546033 454 ntBASIC13.4□□□□□ -0.26
TRAF4Q9BUZ4 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.4□□□□□ -0.26
TRAF4Q9BUZ4 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAF4Q9BUZ4 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAF4Q9BUZ4 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.4□□□□□ -0.26
TRAF4Q9BUZ4 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAF4Q9BUZ4 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAF4Q9BUZ4 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAF4Q9BUZ4 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.4□□□□□ -0.26
TRAF4Q9BUZ4 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAF4Q9BUZ4 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAF4Q9BUZ4 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.4□□□□□ -0.26
TRAF4Q9BUZ4 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
TRAF4Q9BUZ4 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC13.4□□□□□ -0.26
TRAF4Q9BUZ4 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAF4Q9BUZ4 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAF4Q9BUZ4 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.27
TRAF4Q9BUZ4 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
TRAF4Q9BUZ4 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
TRAF4Q9BUZ4 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAF4Q9BUZ4 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAF4Q9BUZ4 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
TRAF4Q9BUZ4 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAF4Q9BUZ4 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.39□□□□□ -0.27
TRAF4Q9BUZ4 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAF4Q9BUZ4 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAF4Q9BUZ4 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAF4Q9BUZ4 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAF4Q9BUZ4 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.39□□□□□ -0.27
TRAF4Q9BUZ4 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
TRAF4Q9BUZ4 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms