Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
PHOX2BQ99453 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PHOX2BQ99453 FAM90A2P-201ENST00000511144 1395 ntBASIC15.12■□□□□ 0.01
PHOX2BQ99453 FAM90A25P-201ENST00000528404 1395 ntBASIC15.12■□□□□ 0.01
PHOX2BQ99453 AC090502.4-201ENST00000551714 1386 ntBASIC15.12■□□□□ 0.01
PHOX2BQ99453 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PHOX2BQ99453 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
PHOX2BQ99453 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PHOX2BQ99453 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PHOX2BQ99453 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
PHOX2BQ99453 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PHOX2BQ99453 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PHOX2BQ99453 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
PHOX2BQ99453 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PHOX2BQ99453 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC15.12■□□□□ 0.01
PHOX2BQ99453 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC15.12■□□□□ 0.01
PHOX2BQ99453 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.12■□□□□ 0.01
PHOX2BQ99453 AC130709.1-201ENST00000484779 1212 ntBASIC15.12■□□□□ 0.01
PHOX2BQ99453 AC084752.1-201ENST00000509766 622 ntBASIC15.12■□□□□ 0.01
PHOX2BQ99453 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC15.12■□□□□ 0.01
PHOX2BQ99453 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC15.12■□□□□ 0.01
PHOX2BQ99453 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.12■□□□□ 0.01
PHOX2BQ99453 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.12■□□□□ 0.01
PHOX2BQ99453 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PHOX2BQ99453 MIR5001-201ENST00000580185 100 ntBASIC15.12■□□□□ 0.01
PHOX2BQ99453 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC15.12■□□□□ 0.01
PHOX2BQ99453 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PHOX2BQ99453 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PHOX2BQ99453 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
PHOX2BQ99453 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.12■□□□□ 0.01
PHOX2BQ99453 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
PHOX2BQ99453 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PHOX2BQ99453 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PHOX2BQ99453 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PHOX2BQ99453 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.12■□□□□ 0.01
PHOX2BQ99453 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PHOX2BQ99453 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PHOX2BQ99453 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.12■□□□□ 0.01
PHOX2BQ99453 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.12■□□□□ 0.01
PHOX2BQ99453 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PHOX2BQ99453 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
PHOX2BQ99453 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.12■□□□□ 0.01
PHOX2BQ99453 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
PHOX2BQ99453 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PHOX2BQ99453 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PHOX2BQ99453 AL596087.1-201ENST00000400979 1969 ntBASIC15.11■□□□□ 0.01
PHOX2BQ99453 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.11■□□□□ 0.01
PHOX2BQ99453 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.11■□□□□ 0.01
PHOX2BQ99453 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PHOX2BQ99453 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PHOX2BQ99453 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.11■□□□□ 0.01
PHOX2BQ99453 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.11■□□□□ 0.01
PHOX2BQ99453 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
PHOX2BQ99453 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PHOX2BQ99453 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC15.11■□□□□ 0.01
PHOX2BQ99453 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PHOX2BQ99453 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PHOX2BQ99453 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC15.11■□□□□ 0.01
PHOX2BQ99453 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC15.11■□□□□ 0.01
PHOX2BQ99453 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC15.11■□□□□ 0.01
PHOX2BQ99453 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC15.11■□□□□ 0.01
PHOX2BQ99453 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
PHOX2BQ99453 AC106820.3-201ENST00000561653 397 ntBASIC15.11■□□□□ 0.01
PHOX2BQ99453 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC15.11■□□□□ 0.01
PHOX2BQ99453 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PHOX2BQ99453 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.11■□□□□ 0.01
PHOX2BQ99453 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
PHOX2BQ99453 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
PHOX2BQ99453 AL132994.2-201ENST00000603120 687 ntBASIC15.11■□□□□ 0.01
PHOX2BQ99453 AC097359.3-201ENST00000603982 1210 ntBASIC15.11■□□□□ 0.01
PHOX2BQ99453 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
PHOX2BQ99453 AC092299.1-201ENST00000632679 757 ntBASIC15.11■□□□□ 0.01
PHOX2BQ99453 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
PHOX2BQ99453 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.11■□□□□ 0.01
PHOX2BQ99453 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.11■□□□□ 0.01
PHOX2BQ99453 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PHOX2BQ99453 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.11■□□□□ 0.01
PHOX2BQ99453 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PHOX2BQ99453 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.11■□□□□ 0.01
PHOX2BQ99453 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
PHOX2BQ99453 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PHOX2BQ99453 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PHOX2BQ99453 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
PHOX2BQ99453 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
PHOX2BQ99453 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
PHOX2BQ99453 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PHOX2BQ99453 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PHOX2BQ99453 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PHOX2BQ99453 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PHOX2BQ99453 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PHOX2BQ99453 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PHOX2BQ99453 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
PHOX2BQ99453 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
PHOX2BQ99453 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PHOX2BQ99453 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.1■□□□□ 0.01
PHOX2BQ99453 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PHOX2BQ99453 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.1■□□□□ 0.01
PHOX2BQ99453 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PHOX2BQ99453 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
PHOX2BQ99453 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms