Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
CHMP6Q96FZ7 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CHMP6Q96FZ7 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC15.06■□□□□ 0
CHMP6Q96FZ7 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC15.06■□□□□ 0
CHMP6Q96FZ7 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CHMP6Q96FZ7 TP73-207ENST00000378290 1831 ntTSL 2 BASIC15.06■□□□□ 0
CHMP6Q96FZ7 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC15.06■□□□□ 0
CHMP6Q96FZ7 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CHMP6Q96FZ7 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
CHMP6Q96FZ7 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC15.06■□□□□ 0
CHMP6Q96FZ7 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CHMP6Q96FZ7 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.06■□□□□ 0
CHMP6Q96FZ7 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CHMP6Q96FZ7 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC15.06■□□□□ 0
CHMP6Q96FZ7 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CHMP6Q96FZ7 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.06■□□□□ 0
CHMP6Q96FZ7 HLA-H-201ENST00000383620 1096 ntBASIC15.06■□□□□ 0
CHMP6Q96FZ7 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.06■□□□□ 0
CHMP6Q96FZ7 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.06■□□□□ 0
CHMP6Q96FZ7 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.06■□□□□ 0
CHMP6Q96FZ7 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.06■□□□□ 0
CHMP6Q96FZ7 AC243562.1-201ENST00000560672 389 ntBASIC15.06■□□□□ 0
CHMP6Q96FZ7 MIR3687-2-201ENST00000577708 61 ntBASIC15.06■□□□□ 0
CHMP6Q96FZ7 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.06■□□□□ 0
CHMP6Q96FZ7 MIR3687-1-201ENST00000614492 61 ntBASIC15.06■□□□□ 0
CHMP6Q96FZ7 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CHMP6Q96FZ7 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CHMP6Q96FZ7 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CHMP6Q96FZ7 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.06■□□□□ 0
CHMP6Q96FZ7 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.06■□□□□ 0
CHMP6Q96FZ7 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC15.06■□□□□ 0
CHMP6Q96FZ7 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CHMP6Q96FZ7 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.06■□□□□ 0
CHMP6Q96FZ7 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
CHMP6Q96FZ7 PEG13-201ENST00000631594 5667 ntBASIC15.06■□□□□ 0
CHMP6Q96FZ7 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CHMP6Q96FZ7 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC15.06■□□□□ 0
CHMP6Q96FZ7 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC15.06■□□□□ 0
CHMP6Q96FZ7 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
CHMP6Q96FZ7 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
CHMP6Q96FZ7 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CHMP6Q96FZ7 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
CHMP6Q96FZ7 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ 0
CHMP6Q96FZ7 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
CHMP6Q96FZ7 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CHMP6Q96FZ7 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC15.05■□□□□ 0
CHMP6Q96FZ7 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
CHMP6Q96FZ7 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC15.05■□□□□ 0
CHMP6Q96FZ7 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
CHMP6Q96FZ7 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC15.05■□□□□ -0
CHMP6Q96FZ7 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CHMP6Q96FZ7 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CHMP6Q96FZ7 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
CHMP6Q96FZ7 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CHMP6Q96FZ7 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.05■□□□□ -0
CHMP6Q96FZ7 AC005237.2-201ENST00000434368 219 ntBASIC15.05■□□□□ -0
CHMP6Q96FZ7 AP000347.1-202ENST00000435868 847 ntBASIC15.05■□□□□ -0
CHMP6Q96FZ7 SPCS2P4-201ENST00000436160 681 ntBASIC15.05■□□□□ -0
CHMP6Q96FZ7 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.05■□□□□ -0
CHMP6Q96FZ7 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC15.05■□□□□ -0
CHMP6Q96FZ7 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.05■□□□□ -0
CHMP6Q96FZ7 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
CHMP6Q96FZ7 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.05■□□□□ -0
CHMP6Q96FZ7 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.05■□□□□ -0
CHMP6Q96FZ7 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.05■□□□□ -0
CHMP6Q96FZ7 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.05■□□□□ -0
CHMP6Q96FZ7 AC005829.1-201ENST00000570002 483 ntBASIC15.05■□□□□ -0
CHMP6Q96FZ7 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.05■□□□□ -0
CHMP6Q96FZ7 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.05■□□□□ -0
CHMP6Q96FZ7 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.05■□□□□ -0
CHMP6Q96FZ7 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.05■□□□□ -0
CHMP6Q96FZ7 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.05■□□□□ -0
CHMP6Q96FZ7 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.05■□□□□ -0
CHMP6Q96FZ7 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CHMP6Q96FZ7 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
CHMP6Q96FZ7 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CHMP6Q96FZ7 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
CHMP6Q96FZ7 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CHMP6Q96FZ7 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CHMP6Q96FZ7 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC15.05■□□□□ -0
CHMP6Q96FZ7 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC15.05■□□□□ -0
CHMP6Q96FZ7 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CHMP6Q96FZ7 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.05■□□□□ -0
CHMP6Q96FZ7 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
CHMP6Q96FZ7 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
CHMP6Q96FZ7 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC15.05■□□□□ -0
CHMP6Q96FZ7 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
CHMP6Q96FZ7 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CHMP6Q96FZ7 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC15.05■□□□□ -0
CHMP6Q96FZ7 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CHMP6Q96FZ7 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC15.05■□□□□ -0
CHMP6Q96FZ7 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
CHMP6Q96FZ7 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
CHMP6Q96FZ7 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC15.04■□□□□ -0
CHMP6Q96FZ7 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC15.04■□□□□ -0
CHMP6Q96FZ7 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
CHMP6Q96FZ7 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
CHMP6Q96FZ7 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
CHMP6Q96FZ7 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC15.04■□□□□ -0
CHMP6Q96FZ7 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms