Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RTP4Q96DX8 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RTP4Q96DX8 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
RTP4Q96DX8 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RTP4Q96DX8 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RTP4Q96DX8 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
RTP4Q96DX8 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RTP4Q96DX8 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RTP4Q96DX8 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
RTP4Q96DX8 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.12■□□□□ 0.01
RTP4Q96DX8 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RTP4Q96DX8 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC15.12■□□□□ 0.01
RTP4Q96DX8 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RTP4Q96DX8 PUDPP3-201ENST00000445368 636 ntBASIC15.12■□□□□ 0.01
RTP4Q96DX8 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.12■□□□□ 0.01
RTP4Q96DX8 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC15.12■□□□□ 0.01
RTP4Q96DX8 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC15.12■□□□□ 0.01
RTP4Q96DX8 AC106820.3-201ENST00000561653 397 ntBASIC15.12■□□□□ 0.01
RTP4Q96DX8 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
RTP4Q96DX8 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC15.12■□□□□ 0.01
RTP4Q96DX8 AC015936.2-201ENST00000593177 259 ntBASIC15.12■□□□□ 0.01
RTP4Q96DX8 AC008735.3-201ENST00000596646 500 ntBASIC15.12■□□□□ 0.01
RTP4Q96DX8 AC010319.3-201ENST00000597028 470 ntBASIC15.12■□□□□ 0.01
RTP4Q96DX8 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.12■□□□□ 0.01
RTP4Q96DX8 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
RTP4Q96DX8 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RTP4Q96DX8 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC15.12■□□□□ 0.01
RTP4Q96DX8 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC15.12■□□□□ 0.01
RTP4Q96DX8 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RTP4Q96DX8 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RTP4Q96DX8 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RTP4Q96DX8 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RTP4Q96DX8 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RTP4Q96DX8 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RTP4Q96DX8 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
RTP4Q96DX8 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RTP4Q96DX8 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RTP4Q96DX8 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
RTP4Q96DX8 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RTP4Q96DX8 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
RTP4Q96DX8 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
RTP4Q96DX8 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RTP4Q96DX8 AC009093.2-202ENST00000620513 2079 ntBASIC15.12■□□□□ 0.01
RTP4Q96DX8 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
RTP4Q96DX8 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RTP4Q96DX8 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RTP4Q96DX8 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RTP4Q96DX8 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RTP4Q96DX8 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
RTP4Q96DX8 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RTP4Q96DX8 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RTP4Q96DX8 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.11■□□□□ 0.01
RTP4Q96DX8 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RTP4Q96DX8 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.11■□□□□ 0.01
RTP4Q96DX8 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RTP4Q96DX8 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RTP4Q96DX8 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC15.11■□□□□ 0.01
RTP4Q96DX8 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RTP4Q96DX8 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RTP4Q96DX8 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RTP4Q96DX8 GUK1-206ENST00000366723 845 ntTSL 5 BASIC15.11■□□□□ 0.01
RTP4Q96DX8 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
RTP4Q96DX8 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RTP4Q96DX8 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC15.11■□□□□ 0.01
RTP4Q96DX8 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RTP4Q96DX8 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
RTP4Q96DX8 AC234783.1-201ENST00000441761 496 ntBASIC15.11■□□□□ 0.01
RTP4Q96DX8 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.11■□□□□ 0.01
RTP4Q96DX8 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC15.11■□□□□ 0.01
RTP4Q96DX8 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.11■□□□□ 0.01
RTP4Q96DX8 TMEM198B-204ENST00000484016 896 ntBASIC15.11■□□□□ 0.01
RTP4Q96DX8 AC106760.1-201ENST00000508690 800 ntBASIC15.11■□□□□ 0.01
RTP4Q96DX8 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RTP4Q96DX8 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC15.11■□□□□ 0.01
RTP4Q96DX8 AP001889.1-201ENST00000525414 633 ntBASIC15.11■□□□□ 0.01
RTP4Q96DX8 TDH-203ENST00000531764 1110 ntBASIC15.11■□□□□ 0.01
RTP4Q96DX8 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.11■□□□□ 0.01
RTP4Q96DX8 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.11■□□□□ 0.01
RTP4Q96DX8 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.11■□□□□ 0.01
RTP4Q96DX8 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.11■□□□□ 0.01
RTP4Q96DX8 AC132938.4-201ENST00000623835 848 ntBASIC15.11■□□□□ 0.01
RTP4Q96DX8 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC15.11■□□□□ 0.01
RTP4Q96DX8 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RTP4Q96DX8 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RTP4Q96DX8 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RTP4Q96DX8 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.11■□□□□ 0.01
RTP4Q96DX8 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.11■□□□□ 0.01
RTP4Q96DX8 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
RTP4Q96DX8 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RTP4Q96DX8 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RTP4Q96DX8 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC15.11■□□□□ 0.01
RTP4Q96DX8 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC15.11■□□□□ 0.01
RTP4Q96DX8 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC15.11■□□□□ 0.01
RTP4Q96DX8 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RTP4Q96DX8 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RTP4Q96DX8 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
RTP4Q96DX8 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RTP4Q96DX8 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RTP4Q96DX8 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RTP4Q96DX8 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms