Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RAB3IL1Q8TBN0 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.93□□□□□ -0.02
RAB3IL1Q8TBN0 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RAB3IL1Q8TBN0 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.93□□□□□ -0.02
RAB3IL1Q8TBN0 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RAB3IL1Q8TBN0 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
RAB3IL1Q8TBN0 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RAB3IL1Q8TBN0 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RAB3IL1Q8TBN0 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RAB3IL1Q8TBN0 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RAB3IL1Q8TBN0 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.93□□□□□ -0.02
RAB3IL1Q8TBN0 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.93□□□□□ -0.02
RAB3IL1Q8TBN0 MTND6P24-201ENST00000440466 518 ntBASIC14.93□□□□□ -0.02
RAB3IL1Q8TBN0 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.93□□□□□ -0.02
RAB3IL1Q8TBN0 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RAB3IL1Q8TBN0 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.93□□□□□ -0.02
RAB3IL1Q8TBN0 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.93□□□□□ -0.02
RAB3IL1Q8TBN0 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RAB3IL1Q8TBN0 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.93□□□□□ -0.02
RAB3IL1Q8TBN0 AL033527.5-202ENST00000641632 1098 ntBASIC14.93□□□□□ -0.02
RAB3IL1Q8TBN0 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.93□□□□□ -0.02
RAB3IL1Q8TBN0 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RAB3IL1Q8TBN0 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RAB3IL1Q8TBN0 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
RAB3IL1Q8TBN0 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RAB3IL1Q8TBN0 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RAB3IL1Q8TBN0 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RAB3IL1Q8TBN0 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RAB3IL1Q8TBN0 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.93□□□□□ -0.02
RAB3IL1Q8TBN0 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
RAB3IL1Q8TBN0 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC14.93□□□□□ -0.02
RAB3IL1Q8TBN0 OR2I1P-208ENST00000641137 4948 ntBASIC14.93□□□□□ -0.02
RAB3IL1Q8TBN0 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
RAB3IL1Q8TBN0 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.93□□□□□ -0.02
RAB3IL1Q8TBN0 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.93□□□□□ -0.02
RAB3IL1Q8TBN0 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RAB3IL1Q8TBN0 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
RAB3IL1Q8TBN0 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC14.92□□□□□ -0.02
RAB3IL1Q8TBN0 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAB3IL1Q8TBN0 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RAB3IL1Q8TBN0 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.92□□□□□ -0.02
RAB3IL1Q8TBN0 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.92□□□□□ -0.02
RAB3IL1Q8TBN0 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAB3IL1Q8TBN0 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAB3IL1Q8TBN0 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAB3IL1Q8TBN0 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.92□□□□□ -0.02
RAB3IL1Q8TBN0 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAB3IL1Q8TBN0 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAB3IL1Q8TBN0 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.92□□□□□ -0.02
RAB3IL1Q8TBN0 AC089987.1-201ENST00000551654 2209 ntBASIC14.92□□□□□ -0.02
RAB3IL1Q8TBN0 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAB3IL1Q8TBN0 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAB3IL1Q8TBN0 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RAB3IL1Q8TBN0 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAB3IL1Q8TBN0 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAB3IL1Q8TBN0 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
RAB3IL1Q8TBN0 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
RAB3IL1Q8TBN0 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAB3IL1Q8TBN0 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
RAB3IL1Q8TBN0 KRT18P32-201ENST00000424695 1287 ntBASIC14.92□□□□□ -0.02
RAB3IL1Q8TBN0 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
RAB3IL1Q8TBN0 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.92□□□□□ -0.02
RAB3IL1Q8TBN0 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.92□□□□□ -0.02
RAB3IL1Q8TBN0 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.92□□□□□ -0.02
RAB3IL1Q8TBN0 AP001160.2-201ENST00000596071 487 ntBASIC14.92□□□□□ -0.02
RAB3IL1Q8TBN0 AF228730.6-201ENST00000641497 218 ntBASIC14.92□□□□□ -0.02
RAB3IL1Q8TBN0 AC084121.3-201ENST00000641716 218 ntBASIC14.92□□□□□ -0.02
RAB3IL1Q8TBN0 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAB3IL1Q8TBN0 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
RAB3IL1Q8TBN0 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
RAB3IL1Q8TBN0 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAB3IL1Q8TBN0 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.92□□□□□ -0.02
RAB3IL1Q8TBN0 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
RAB3IL1Q8TBN0 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAB3IL1Q8TBN0 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.92□□□□□ -0.02
RAB3IL1Q8TBN0 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.92□□□□□ -0.02
RAB3IL1Q8TBN0 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAB3IL1Q8TBN0 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.92□□□□□ -0.02
RAB3IL1Q8TBN0 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAB3IL1Q8TBN0 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAB3IL1Q8TBN0 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RAB3IL1Q8TBN0 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAB3IL1Q8TBN0 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
RAB3IL1Q8TBN0 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.92□□□□□ -0.02
RAB3IL1Q8TBN0 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
RAB3IL1Q8TBN0 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RAB3IL1Q8TBN0 TCAF1P1-201ENST00000414990 2232 ntBASIC14.92□□□□□ -0.02
RAB3IL1Q8TBN0 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC14.92□□□□□ -0.02
RAB3IL1Q8TBN0 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAB3IL1Q8TBN0 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RAB3IL1Q8TBN0 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAB3IL1Q8TBN0 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAB3IL1Q8TBN0 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAB3IL1Q8TBN0 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAB3IL1Q8TBN0 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
RAB3IL1Q8TBN0 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAB3IL1Q8TBN0 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAB3IL1Q8TBN0 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.91□□□□□ -0.02
RAB3IL1Q8TBN0 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
RAB3IL1Q8TBN0 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms