Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC170Q8IYT3 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC16.03■□□□□ 0.16
CCDC170Q8IYT3 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC170Q8IYT3 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC170Q8IYT3 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC170Q8IYT3 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC170Q8IYT3 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC170Q8IYT3 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CCDC170Q8IYT3 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC170Q8IYT3 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC16.03■□□□□ 0.16
CCDC170Q8IYT3 CICP16-201ENST00000502609 2813 ntBASIC16.03■□□□□ 0.16
CCDC170Q8IYT3 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC170Q8IYT3 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC170Q8IYT3 AC003102.2-201ENST00000589195 1469 ntBASIC16.03■□□□□ 0.16
CCDC170Q8IYT3 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CCDC170Q8IYT3 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC16.03■□□□□ 0.16
CCDC170Q8IYT3 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC170Q8IYT3 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC170Q8IYT3 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC170Q8IYT3 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCDC170Q8IYT3 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCDC170Q8IYT3 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCDC170Q8IYT3 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCDC170Q8IYT3 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CCDC170Q8IYT3 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCDC170Q8IYT3 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.02■□□□□ 0.16
CCDC170Q8IYT3 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CCDC170Q8IYT3 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC16.02■□□□□ 0.16
CCDC170Q8IYT3 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCDC170Q8IYT3 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC16.02■□□□□ 0.16
CCDC170Q8IYT3 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC16.02■□□□□ 0.16
CCDC170Q8IYT3 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC16.02■□□□□ 0.16
CCDC170Q8IYT3 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
CCDC170Q8IYT3 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCDC170Q8IYT3 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CCDC170Q8IYT3 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCDC170Q8IYT3 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCDC170Q8IYT3 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CCDC170Q8IYT3 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCDC170Q8IYT3 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCDC170Q8IYT3 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CCDC170Q8IYT3 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCDC170Q8IYT3 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.02■□□□□ 0.16
CCDC170Q8IYT3 SERF2-209ENST00000409646 559 ntTSL 4 BASIC16.02■□□□□ 0.16
CCDC170Q8IYT3 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.02■□□□□ 0.16
CCDC170Q8IYT3 AC241585.1-201ENST00000433527 519 ntBASIC16.02■□□□□ 0.16
CCDC170Q8IYT3 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.02■□□□□ 0.16
CCDC170Q8IYT3 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
CCDC170Q8IYT3 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC16.02■□□□□ 0.16
CCDC170Q8IYT3 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CCDC170Q8IYT3 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.02■□□□□ 0.16
CCDC170Q8IYT3 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.02■□□□□ 0.16
CCDC170Q8IYT3 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.02■□□□□ 0.16
CCDC170Q8IYT3 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CCDC170Q8IYT3 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC16.02■□□□□ 0.16
CCDC170Q8IYT3 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCDC170Q8IYT3 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC16.02■□□□□ 0.16
CCDC170Q8IYT3 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC16.02■□□□□ 0.15
CCDC170Q8IYT3 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC16.02■□□□□ 0.15
CCDC170Q8IYT3 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
CCDC170Q8IYT3 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
CCDC170Q8IYT3 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CCDC170Q8IYT3 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
CCDC170Q8IYT3 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
CCDC170Q8IYT3 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CCDC170Q8IYT3 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CCDC170Q8IYT3 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CCDC170Q8IYT3 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
CCDC170Q8IYT3 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CCDC170Q8IYT3 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC16.02■□□□□ 0.15
CCDC170Q8IYT3 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC170Q8IYT3 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC170Q8IYT3 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC170Q8IYT3 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CCDC170Q8IYT3 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CCDC170Q8IYT3 AL136172.1-201ENST00000598590 1394 ntBASIC16.01■□□□□ 0.15
CCDC170Q8IYT3 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC170Q8IYT3 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC170Q8IYT3 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC170Q8IYT3 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC170Q8IYT3 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC170Q8IYT3 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC170Q8IYT3 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC170Q8IYT3 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CCDC170Q8IYT3 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CCDC170Q8IYT3 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC170Q8IYT3 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC170Q8IYT3 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.01■□□□□ 0.15
CCDC170Q8IYT3 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC170Q8IYT3 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.01■□□□□ 0.15
CCDC170Q8IYT3 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC170Q8IYT3 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC170Q8IYT3 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.01■□□□□ 0.15
CCDC170Q8IYT3 AC114812.1-204ENST00000449669 728 ntBASIC16.01■□□□□ 0.15
CCDC170Q8IYT3 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.01■□□□□ 0.15
CCDC170Q8IYT3 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.01■□□□□ 0.15
CCDC170Q8IYT3 SPDYE18-201ENST00000510091 1050 ntBASIC16.01■□□□□ 0.15
CCDC170Q8IYT3 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
CCDC170Q8IYT3 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.01■□□□□ 0.15
CCDC170Q8IYT3 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms