Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 SALL4P5-201ENST00000419001 1760 ntBASIC14.3□□□□□ -0.12
RNF44Q7L0R7 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RNF44Q7L0R7 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
RNF44Q7L0R7 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC14.3□□□□□ -0.12
RNF44Q7L0R7 INE2-201ENST00000630399 1874 ntBASIC14.3□□□□□ -0.12
RNF44Q7L0R7 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
RNF44Q7L0R7 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC14.3□□□□□ -0.12
RNF44Q7L0R7 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC14.3□□□□□ -0.12
RNF44Q7L0R7 AL355994.2-201ENST00000447882 704 ntBASIC14.3□□□□□ -0.12
RNF44Q7L0R7 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RNF44Q7L0R7 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC14.3□□□□□ -0.12
RNF44Q7L0R7 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC14.3□□□□□ -0.12
RNF44Q7L0R7 TUBB1P2-201ENST00000422712 1306 ntBASIC14.3□□□□□ -0.12
RNF44Q7L0R7 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC14.3□□□□□ -0.12
RNF44Q7L0R7 TUBB1P1-201ENST00000503144 1300 ntBASIC14.3□□□□□ -0.12
RNF44Q7L0R7 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RNF44Q7L0R7 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RNF44Q7L0R7 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RNF44Q7L0R7 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RNF44Q7L0R7 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RNF44Q7L0R7 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
RNF44Q7L0R7 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RNF44Q7L0R7 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.3□□□□□ -0.12
RNF44Q7L0R7 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RNF44Q7L0R7 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
RNF44Q7L0R7 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RNF44Q7L0R7 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.3□□□□□ -0.12
RNF44Q7L0R7 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RNF44Q7L0R7 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.29□□□□□ -0.12
RNF44Q7L0R7 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.29□□□□□ -0.12
RNF44Q7L0R7 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RNF44Q7L0R7 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF44Q7L0R7 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF44Q7L0R7 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF44Q7L0R7 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF44Q7L0R7 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF44Q7L0R7 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
RNF44Q7L0R7 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF44Q7L0R7 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF44Q7L0R7 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
RNF44Q7L0R7 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RNF44Q7L0R7 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
RNF44Q7L0R7 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RNF44Q7L0R7 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RNF44Q7L0R7 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF44Q7L0R7 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF44Q7L0R7 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RNF44Q7L0R7 AC007274.1-201ENST00000439805 662 ntBASIC14.29□□□□□ -0.12
RNF44Q7L0R7 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.29□□□□□ -0.12
RNF44Q7L0R7 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
RNF44Q7L0R7 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RNF44Q7L0R7 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RNF44Q7L0R7 AC131206.1-201ENST00000538078 1211 ntBASIC14.29□□□□□ -0.12
RNF44Q7L0R7 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
RNF44Q7L0R7 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC14.29□□□□□ -0.12
RNF44Q7L0R7 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC14.29□□□□□ -0.12
RNF44Q7L0R7 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC14.29□□□□□ -0.12
RNF44Q7L0R7 EEF1DP1-201ENST00000585891 896 ntBASIC14.29□□□□□ -0.12
RNF44Q7L0R7 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF44Q7L0R7 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF44Q7L0R7 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF44Q7L0R7 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF44Q7L0R7 AC023824.1-201ENST00000562945 2975 ntBASIC14.29□□□□□ -0.12
RNF44Q7L0R7 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.29□□□□□ -0.12
RNF44Q7L0R7 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RNF44Q7L0R7 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.29□□□□□ -0.12
RNF44Q7L0R7 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.29□□□□□ -0.12
RNF44Q7L0R7 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.29□□□□□ -0.12
RNF44Q7L0R7 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.29□□□□□ -0.12
RNF44Q7L0R7 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RNF44Q7L0R7 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
RNF44Q7L0R7 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF44Q7L0R7 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RNF44Q7L0R7 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF44Q7L0R7 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF44Q7L0R7 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
RNF44Q7L0R7 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.28□□□□□ -0.12
RNF44Q7L0R7 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
RNF44Q7L0R7 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RNF44Q7L0R7 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.28□□□□□ -0.12
RNF44Q7L0R7 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.28□□□□□ -0.12
RNF44Q7L0R7 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RNF44Q7L0R7 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.28□□□□□ -0.12
RNF44Q7L0R7 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF44Q7L0R7 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF44Q7L0R7 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF44Q7L0R7 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
RNF44Q7L0R7 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF44Q7L0R7 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF44Q7L0R7 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF44Q7L0R7 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF44Q7L0R7 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF44Q7L0R7 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
RNF44Q7L0R7 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF44Q7L0R7 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF44Q7L0R7 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF44Q7L0R7 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF44Q7L0R7 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC14.28□□□□□ -0.12
RNF44Q7L0R7 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
RNF44Q7L0R7 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms