Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AC124312.2-201ENST00000546615 427 ntTSL 3 BASIC15.77■□□□□ 0.12
VARS2Q5ST30 CHMP4BP1-201ENST00000556017 588 ntBASIC15.77■□□□□ 0.12
VARS2Q5ST30 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC15.77■□□□□ 0.12
VARS2Q5ST30 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC15.77■□□□□ 0.12
VARS2Q5ST30 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC15.77■□□□□ 0.12
VARS2Q5ST30 AC008805.1-201ENST00000590892 364 ntBASIC15.77■□□□□ 0.12
VARS2Q5ST30 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
VARS2Q5ST30 AC018695.4-201ENST00000602706 689 ntTSL 5 BASIC15.77■□□□□ 0.12
VARS2Q5ST30 AC027601.3-201ENST00000622907 509 ntBASIC15.77■□□□□ 0.12
VARS2Q5ST30 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC15.77■□□□□ 0.12
VARS2Q5ST30 AL805961.1-203ENST00000641078 1258 ntBASIC15.77■□□□□ 0.12
VARS2Q5ST30 Z98259.2-201ENST00000641583 609 ntBASIC15.77■□□□□ 0.12
VARS2Q5ST30 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
VARS2Q5ST30 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
VARS2Q5ST30 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
VARS2Q5ST30 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
VARS2Q5ST30 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
VARS2Q5ST30 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
VARS2Q5ST30 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
VARS2Q5ST30 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
VARS2Q5ST30 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
VARS2Q5ST30 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
VARS2Q5ST30 AC073347.1-201ENST00000421633 2643 ntBASIC15.77■□□□□ 0.11
VARS2Q5ST30 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
VARS2Q5ST30 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.77■□□□□ 0.11
VARS2Q5ST30 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.76■□□□□ 0.11
VARS2Q5ST30 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.76■□□□□ 0.11
VARS2Q5ST30 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
VARS2Q5ST30 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
VARS2Q5ST30 MBLAC2-202ENST00000514906 1936 ntBASIC15.76■□□□□ 0.11
VARS2Q5ST30 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
VARS2Q5ST30 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
VARS2Q5ST30 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
VARS2Q5ST30 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
VARS2Q5ST30 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
VARS2Q5ST30 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VARS2Q5ST30 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
VARS2Q5ST30 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VARS2Q5ST30 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VARS2Q5ST30 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
VARS2Q5ST30 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
VARS2Q5ST30 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
VARS2Q5ST30 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
VARS2Q5ST30 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
VARS2Q5ST30 SLC16A6P1-201ENST00000413214 1059 ntBASIC15.76■□□□□ 0.11
VARS2Q5ST30 ACTG1P2-201ENST00000415776 1125 ntBASIC15.76■□□□□ 0.11
VARS2Q5ST30 ACTG1P11-201ENST00000425411 1125 ntBASIC15.76■□□□□ 0.11
VARS2Q5ST30 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
VARS2Q5ST30 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC15.76■□□□□ 0.11
VARS2Q5ST30 AC125604.1-201ENST00000496255 707 ntBASIC15.76■□□□□ 0.11
VARS2Q5ST30 LINC02270-202ENST00000515691 541 ntTSL 3 BASIC15.76■□□□□ 0.11
VARS2Q5ST30 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
VARS2Q5ST30 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC15.76■□□□□ 0.11
VARS2Q5ST30 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC15.76■□□□□ 0.11
VARS2Q5ST30 AC087762.1-201ENST00000559755 643 ntTSL 3 BASIC15.76■□□□□ 0.11
VARS2Q5ST30 SNORD3B-2-202ENST00000571722 791 ntBASIC15.76■□□□□ 0.11
VARS2Q5ST30 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC15.76■□□□□ 0.11
VARS2Q5ST30 MIR5572-201ENST00000583188 137 ntBASIC15.76■□□□□ 0.11
VARS2Q5ST30 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC15.76■□□□□ 0.11
VARS2Q5ST30 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC15.76■□□□□ 0.11
VARS2Q5ST30 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VARS2Q5ST30 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC15.76■□□□□ 0.11
VARS2Q5ST30 MIR6720-201ENST00000611664 98 ntBASIC15.76■□□□□ 0.11
VARS2Q5ST30 MIR7845-201ENST00000618396 99 ntBASIC15.76■□□□□ 0.11
VARS2Q5ST30 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC15.76■□□□□ 0.11
VARS2Q5ST30 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC15.76■□□□□ 0.11
VARS2Q5ST30 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
VARS2Q5ST30 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.76■□□□□ 0.11
VARS2Q5ST30 AC013726.1-201ENST00000563747 2285 ntBASIC15.76■□□□□ 0.11
VARS2Q5ST30 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VARS2Q5ST30 AC023824.1-201ENST00000562945 2975 ntBASIC15.76■□□□□ 0.11
VARS2Q5ST30 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
VARS2Q5ST30 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VARS2Q5ST30 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
VARS2Q5ST30 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VARS2Q5ST30 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
VARS2Q5ST30 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VARS2Q5ST30 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
VARS2Q5ST30 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
VARS2Q5ST30 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VARS2Q5ST30 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VARS2Q5ST30 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
VARS2Q5ST30 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
VARS2Q5ST30 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
VARS2Q5ST30 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.75■□□□□ 0.11
VARS2Q5ST30 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.75■□□□□ 0.11
VARS2Q5ST30 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
VARS2Q5ST30 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
VARS2Q5ST30 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VARS2Q5ST30 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
VARS2Q5ST30 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
VARS2Q5ST30 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.75■□□□□ 0.11
VARS2Q5ST30 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
VARS2Q5ST30 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
VARS2Q5ST30 IL4-201ENST00000231449 616 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VARS2Q5ST30 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VARS2Q5ST30 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
VARS2Q5ST30 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
VARS2Q5ST30 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC15.75■□□□□ 0.11
VARS2Q5ST30 Z97180.1-201ENST00000445173 988 ntBASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms