Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
RSPO1Q2MKA7 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
RSPO1Q2MKA7 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RSPO1Q2MKA7 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RSPO1Q2MKA7 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
RSPO1Q2MKA7 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RSPO1Q2MKA7 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RSPO1Q2MKA7 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC12.82□□□□□ -0.36
RSPO1Q2MKA7 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RSPO1Q2MKA7 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
RSPO1Q2MKA7 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
RSPO1Q2MKA7 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
RSPO1Q2MKA7 MIR1202-201ENST00000408529 83 ntBASIC12.82□□□□□ -0.36
RSPO1Q2MKA7 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RSPO1Q2MKA7 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC12.82□□□□□ -0.36
RSPO1Q2MKA7 USB1-202ENST00000423271 1217 ntTSL 2 BASIC12.82□□□□□ -0.36
RSPO1Q2MKA7 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC12.82□□□□□ -0.36
RSPO1Q2MKA7 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC12.82□□□□□ -0.36
RSPO1Q2MKA7 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RSPO1Q2MKA7 CHMP1AP1-201ENST00000445563 662 ntBASIC12.82□□□□□ -0.36
RSPO1Q2MKA7 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RSPO1Q2MKA7 PFN2-215ENST00000497148 743 ntTSL 4 BASIC12.82□□□□□ -0.36
RSPO1Q2MKA7 CDC23-208ENST00000505120 455 ntTSL 3 BASIC12.82□□□□□ -0.36
RSPO1Q2MKA7 COX5BP1-201ENST00000507622 393 ntBASIC12.82□□□□□ -0.36
RSPO1Q2MKA7 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC12.82□□□□□ -0.36
RSPO1Q2MKA7 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC12.82□□□□□ -0.36
RSPO1Q2MKA7 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
RSPO1Q2MKA7 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RSPO1Q2MKA7 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC12.82□□□□□ -0.36
RSPO1Q2MKA7 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
RSPO1Q2MKA7 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC12.82□□□□□ -0.36
RSPO1Q2MKA7 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
RSPO1Q2MKA7 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
RSPO1Q2MKA7 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
RSPO1Q2MKA7 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC12.82□□□□□ -0.36
RSPO1Q2MKA7 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RSPO1Q2MKA7 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC12.82□□□□□ -0.36
RSPO1Q2MKA7 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RSPO1Q2MKA7 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC12.82□□□□□ -0.36
RSPO1Q2MKA7 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RSPO1Q2MKA7 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RSPO1Q2MKA7 PDIA3P1-201ENST00000471856 1510 ntBASIC12.82□□□□□ -0.36
RSPO1Q2MKA7 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
RSPO1Q2MKA7 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
RSPO1Q2MKA7 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
RSPO1Q2MKA7 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.82□□□□□ -0.36
RSPO1Q2MKA7 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RSPO1Q2MKA7 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RSPO1Q2MKA7 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RSPO1Q2MKA7 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RSPO1Q2MKA7 BANP-203ENST00000393207 2438 ntTSL 2 BASIC12.81□□□□□ -0.36
RSPO1Q2MKA7 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC12.81□□□□□ -0.36
RSPO1Q2MKA7 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RSPO1Q2MKA7 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
RSPO1Q2MKA7 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RSPO1Q2MKA7 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
RSPO1Q2MKA7 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RSPO1Q2MKA7 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
RSPO1Q2MKA7 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
RSPO1Q2MKA7 SNX21-203ENST00000372541 771 ntTSL 2 BASIC12.81□□□□□ -0.36
RSPO1Q2MKA7 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
RSPO1Q2MKA7 GZMB-202ENST00000382540 816 ntTSL 5 BASIC12.81□□□□□ -0.36
RSPO1Q2MKA7 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC12.81□□□□□ -0.36
RSPO1Q2MKA7 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RSPO1Q2MKA7 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC12.81□□□□□ -0.36
RSPO1Q2MKA7 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
RSPO1Q2MKA7 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
RSPO1Q2MKA7 RPL7P3-201ENST00000441388 714 ntBASIC12.81□□□□□ -0.36
RSPO1Q2MKA7 GAPDHP21-201ENST00000450301 1010 ntBASIC12.81□□□□□ -0.36
RSPO1Q2MKA7 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC12.81□□□□□ -0.36
RSPO1Q2MKA7 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
RSPO1Q2MKA7 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC12.81□□□□□ -0.36
RSPO1Q2MKA7 SORD2P-201ENST00000558556 1069 ntBASIC12.81□□□□□ -0.36
RSPO1Q2MKA7 APRT-204ENST00000563655 709 ntTSL 5 BASIC12.81□□□□□ -0.36
RSPO1Q2MKA7 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC12.81□□□□□ -0.36
RSPO1Q2MKA7 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC12.81□□□□□ -0.36
RSPO1Q2MKA7 AC106886.1-201ENST00000568660 600 ntBASIC12.81□□□□□ -0.36
RSPO1Q2MKA7 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC12.81□□□□□ -0.36
RSPO1Q2MKA7 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
RSPO1Q2MKA7 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC12.81□□□□□ -0.36
RSPO1Q2MKA7 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC12.81□□□□□ -0.36
RSPO1Q2MKA7 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RSPO1Q2MKA7 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC12.81□□□□□ -0.36
RSPO1Q2MKA7 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RSPO1Q2MKA7 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC12.81□□□□□ -0.36
RSPO1Q2MKA7 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RSPO1Q2MKA7 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
RSPO1Q2MKA7 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RSPO1Q2MKA7 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
RSPO1Q2MKA7 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RSPO1Q2MKA7 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC12.81□□□□□ -0.36
RSPO1Q2MKA7 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
RSPO1Q2MKA7 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC12.81□□□□□ -0.36
RSPO1Q2MKA7 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RSPO1Q2MKA7 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC12.81□□□□□ -0.36
RSPO1Q2MKA7 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC12.81□□□□□ -0.36
RSPO1Q2MKA7 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RSPO1Q2MKA7 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC12.81□□□□□ -0.36
RSPO1Q2MKA7 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RSPO1Q2MKA7 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms