Protein–RNA interactions for Protein: Q15012

LAPTM4A, Lysosomal-associated transmembrane protein 4A, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4AQ15012 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.02□□□□□ -0.17
LAPTM4AQ15012 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
LAPTM4AQ15012 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
LAPTM4AQ15012 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.02□□□□□ -0.17
LAPTM4AQ15012 AC130686.1-201ENST00000622936 2466 ntBASIC14.02□□□□□ -0.17
LAPTM4AQ15012 AC105206.1-202ENST00000314927 2368 ntBASIC14.02□□□□□ -0.17
LAPTM4AQ15012 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LAPTM4AQ15012 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
LAPTM4AQ15012 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LAPTM4AQ15012 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LAPTM4AQ15012 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.01□□□□□ -0.17
LAPTM4AQ15012 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
LAPTM4AQ15012 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.01□□□□□ -0.17
LAPTM4AQ15012 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LAPTM4AQ15012 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.01□□□□□ -0.17
LAPTM4AQ15012 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LAPTM4AQ15012 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LAPTM4AQ15012 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
LAPTM4AQ15012 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC14.01□□□□□ -0.17
LAPTM4AQ15012 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
LAPTM4AQ15012 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LAPTM4AQ15012 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LAPTM4AQ15012 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
LAPTM4AQ15012 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LAPTM4AQ15012 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LAPTM4AQ15012 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.01□□□□□ -0.17
LAPTM4AQ15012 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
LAPTM4AQ15012 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LAPTM4AQ15012 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LAPTM4AQ15012 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC14.01□□□□□ -0.17
LAPTM4AQ15012 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LAPTM4AQ15012 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LAPTM4AQ15012 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LAPTM4AQ15012 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LAPTM4AQ15012 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
LAPTM4AQ15012 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LAPTM4AQ15012 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.01□□□□□ -0.17
LAPTM4AQ15012 AL049829.1-201ENST00000465411 156 ntBASIC14.01□□□□□ -0.17
LAPTM4AQ15012 KRT18P43-201ENST00000469825 1281 ntBASIC14.01□□□□□ -0.17
LAPTM4AQ15012 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.01□□□□□ -0.17
LAPTM4AQ15012 HLA-V-204ENST00000476601 1289 ntBASIC14.01□□□□□ -0.17
LAPTM4AQ15012 AC114550.1-202ENST00000522661 643 ntTSL 2 BASIC14.01□□□□□ -0.17
LAPTM4AQ15012 AL512361.1-201ENST00000554200 418 ntBASIC14.01□□□□□ -0.17
LAPTM4AQ15012 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
LAPTM4AQ15012 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC14.01□□□□□ -0.17
LAPTM4AQ15012 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LAPTM4AQ15012 AC018695.4-201ENST00000602706 689 ntTSL 5 BASIC14.01□□□□□ -0.17
LAPTM4AQ15012 MKKS-203ENST00000609375 882 ntTSL 2 BASIC14.01□□□□□ -0.17
LAPTM4AQ15012 AC097478.2-201ENST00000610572 514 ntBASIC14.01□□□□□ -0.17
LAPTM4AQ15012 SPDYE12P-201ENST00000618416 771 ntBASIC14.01□□□□□ -0.17
LAPTM4AQ15012 AC092723.2-201ENST00000624955 793 ntBASIC14.01□□□□□ -0.17
LAPTM4AQ15012 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.01□□□□□ -0.17
LAPTM4AQ15012 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.01□□□□□ -0.17
LAPTM4AQ15012 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LAPTM4AQ15012 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.01□□□□□ -0.17
LAPTM4AQ15012 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LAPTM4AQ15012 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LAPTM4AQ15012 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
LAPTM4AQ15012 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LAPTM4AQ15012 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
LAPTM4AQ15012 AL359881.3-201ENST00000602640 1721 ntBASIC14.01□□□□□ -0.17
LAPTM4AQ15012 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LAPTM4AQ15012 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
LAPTM4AQ15012 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LAPTM4AQ15012 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
LAPTM4AQ15012 CICP16-201ENST00000502609 2813 ntBASIC14□□□□□ -0.17
LAPTM4AQ15012 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14□□□□□ -0.17
LAPTM4AQ15012 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LAPTM4AQ15012 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LAPTM4AQ15012 CYP2AB1P-202ENST00000454440 1456 ntBASIC14□□□□□ -0.17
LAPTM4AQ15012 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
LAPTM4AQ15012 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
LAPTM4AQ15012 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14□□□□□ -0.17
LAPTM4AQ15012 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC14□□□□□ -0.17
LAPTM4AQ15012 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14□□□□□ -0.17
LAPTM4AQ15012 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14□□□□□ -0.17
LAPTM4AQ15012 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LAPTM4AQ15012 AL360270.3-201ENST00000609118 1348 ntBASIC14□□□□□ -0.17
LAPTM4AQ15012 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LAPTM4AQ15012 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LAPTM4AQ15012 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14□□□□□ -0.17
LAPTM4AQ15012 IL4-201ENST00000231449 616 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LAPTM4AQ15012 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LAPTM4AQ15012 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LAPTM4AQ15012 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
LAPTM4AQ15012 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LAPTM4AQ15012 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC14□□□□□ -0.17
LAPTM4AQ15012 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
LAPTM4AQ15012 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14□□□□□ -0.17
LAPTM4AQ15012 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC14□□□□□ -0.17
LAPTM4AQ15012 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14□□□□□ -0.17
LAPTM4AQ15012 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14□□□□□ -0.17
LAPTM4AQ15012 AC027369.6-201ENST00000525520 931 ntBASIC14□□□□□ -0.17
LAPTM4AQ15012 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14□□□□□ -0.17
LAPTM4AQ15012 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
LAPTM4AQ15012 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14□□□□□ -0.17
LAPTM4AQ15012 AC025678.2-201ENST00000562061 970 ntBASIC14□□□□□ -0.17
LAPTM4AQ15012 AC051619.7-201ENST00000568314 623 ntBASIC14□□□□□ -0.17
LAPTM4AQ15012 SAMD11P1-201ENST00000571429 661 ntBASIC14□□□□□ -0.17
LAPTM4AQ15012 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms