Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SPCS3P61009 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SPCS3P61009 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC12.22□□□□□ -0.45
SPCS3P61009 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SPCS3P61009 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
SPCS3P61009 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SPCS3P61009 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
SPCS3P61009 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC12.22□□□□□ -0.45
SPCS3P61009 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SPCS3P61009 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SPCS3P61009 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SPCS3P61009 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
SPCS3P61009 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
SPCS3P61009 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SPCS3P61009 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SPCS3P61009 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
SPCS3P61009 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC12.22□□□□□ -0.45
SPCS3P61009 FABP5-202ENST00000396359 986 ntTSL 5 BASIC12.22□□□□□ -0.45
SPCS3P61009 RPL37AP1-201ENST00000412502 279 ntBASIC12.22□□□□□ -0.45
SPCS3P61009 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC12.22□□□□□ -0.45
SPCS3P61009 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC12.22□□□□□ -0.45
SPCS3P61009 AC023141.5-201ENST00000458585 616 ntBASIC12.22□□□□□ -0.45
SPCS3P61009 HLA-V-204ENST00000476601 1289 ntBASIC12.22□□□□□ -0.45
SPCS3P61009 SDHAP3-202ENST00000515467 728 ntBASIC12.22□□□□□ -0.45
SPCS3P61009 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC12.22□□□□□ -0.45
SPCS3P61009 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC12.22□□□□□ -0.45
SPCS3P61009 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC12.22□□□□□ -0.45
SPCS3P61009 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC12.22□□□□□ -0.45
SPCS3P61009 AC000095.1-201ENST00000603208 874 ntBASIC12.22□□□□□ -0.45
SPCS3P61009 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
SPCS3P61009 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SPCS3P61009 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SPCS3P61009 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC12.22□□□□□ -0.45
SPCS3P61009 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SPCS3P61009 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
SPCS3P61009 AC083964.2-201ENST00000623988 2396 ntBASIC12.22□□□□□ -0.45
SPCS3P61009 AL031595.1-201ENST00000623969 4709 ntBASIC12.22□□□□□ -0.45
SPCS3P61009 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC12.22□□□□□ -0.45
SPCS3P61009 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SPCS3P61009 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
SPCS3P61009 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC12.22□□□□□ -0.45
SPCS3P61009 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
SPCS3P61009 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SPCS3P61009 FES-203ENST00000394302 2133 ntTSL 5 BASIC12.22□□□□□ -0.45
SPCS3P61009 PES1-204ENST00000402284 2144 ntTSL 5 BASIC12.22□□□□□ -0.45
SPCS3P61009 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
SPCS3P61009 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SPCS3P61009 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SPCS3P61009 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
SPCS3P61009 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
SPCS3P61009 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
SPCS3P61009 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SPCS3P61009 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SPCS3P61009 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SPCS3P61009 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SPCS3P61009 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SPCS3P61009 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SPCS3P61009 HSPB7-201ENST00000311890 2892 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
SPCS3P61009 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC12.21□□□□□ -0.45
SPCS3P61009 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SPCS3P61009 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
SPCS3P61009 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC12.21□□□□□ -0.45
SPCS3P61009 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC12.21□□□□□ -0.45
SPCS3P61009 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SPCS3P61009 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
SPCS3P61009 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SPCS3P61009 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SPCS3P61009 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SPCS3P61009 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SPCS3P61009 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SPCS3P61009 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SPCS3P61009 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC12.21□□□□□ -0.45
SPCS3P61009 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SPCS3P61009 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SPCS3P61009 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SPCS3P61009 CYB561D1-206ENST00000496961 3424 ntTSL 2 BASIC12.21□□□□□ -0.45
SPCS3P61009 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SPCS3P61009 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
SPCS3P61009 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SPCS3P61009 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC12.21□□□□□ -0.45
SPCS3P61009 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC12.21□□□□□ -0.45
SPCS3P61009 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC12.21□□□□□ -0.45
SPCS3P61009 RN7SL618P-201ENST00000477850 296 ntBASIC12.21□□□□□ -0.45
SPCS3P61009 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC12.21□□□□□ -0.45
SPCS3P61009 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC12.21□□□□□ -0.45
SPCS3P61009 AL512356.2-201ENST00000546955 174 ntBASIC12.21□□□□□ -0.45
SPCS3P61009 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC12.21□□□□□ -0.45
SPCS3P61009 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC12.21□□□□□ -0.45
SPCS3P61009 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SPCS3P61009 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC12.21□□□□□ -0.45
SPCS3P61009 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
SPCS3P61009 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC12.21□□□□□ -0.45
SPCS3P61009 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SPCS3P61009 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
SPCS3P61009 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
SPCS3P61009 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC12.21□□□□□ -0.46
SPCS3P61009 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
SPCS3P61009 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
SPCS3P61009 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC12.21□□□□□ -0.46
SPCS3P61009 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms