Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC17.35■□□□□ 0.37
RHBDL3P58872 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RHBDL3P58872 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RHBDL3P58872 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RHBDL3P58872 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.35■□□□□ 0.37
RHBDL3P58872 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RHBDL3P58872 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
RHBDL3P58872 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
RHBDL3P58872 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RHBDL3P58872 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
RHBDL3P58872 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC17.35■□□□□ 0.37
RHBDL3P58872 POR-201ENST00000394893 2532 ntTSL 5 BASIC17.35■□□□□ 0.37
RHBDL3P58872 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RHBDL3P58872 BANF1P3-201ENST00000412556 261 ntBASIC17.35■□□□□ 0.37
RHBDL3P58872 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RHBDL3P58872 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RHBDL3P58872 NDUFS6P1-201ENST00000485187 316 ntBASIC17.35■□□□□ 0.37
RHBDL3P58872 RHEB-207ENST00000496004 744 ntTSL 2 BASIC17.35■□□□□ 0.37
RHBDL3P58872 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC17.35■□□□□ 0.37
RHBDL3P58872 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC17.35■□□□□ 0.37
RHBDL3P58872 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RHBDL3P58872 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RHBDL3P58872 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC17.35■□□□□ 0.37
RHBDL3P58872 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC17.35■□□□□ 0.37
RHBDL3P58872 AL022334.2-201ENST00000610000 484 ntBASIC17.35■□□□□ 0.37
RHBDL3P58872 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RHBDL3P58872 MARS-233ENST00000628866 2583 ntTSL 5 BASIC17.35■□□□□ 0.37
RHBDL3P58872 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RHBDL3P58872 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RHBDL3P58872 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RHBDL3P58872 SLC9A7P1-201ENST00000554295 3311 ntBASIC17.35■□□□□ 0.37
RHBDL3P58872 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RHBDL3P58872 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RHBDL3P58872 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
RHBDL3P58872 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC17.35■□□□□ 0.37
RHBDL3P58872 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RHBDL3P58872 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC17.35■□□□□ 0.37
RHBDL3P58872 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RHBDL3P58872 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RHBDL3P58872 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RHBDL3P58872 AC104640.1-201ENST00000562617 2109 ntBASIC17.35■□□□□ 0.37
RHBDL3P58872 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC17.35■□□□□ 0.37
RHBDL3P58872 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RHBDL3P58872 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
RHBDL3P58872 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RHBDL3P58872 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
RHBDL3P58872 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
RHBDL3P58872 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC17.34■□□□□ 0.37
RHBDL3P58872 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.34■□□□□ 0.37
RHBDL3P58872 JTB-202ENST00000356648 1040 ntTSL 2 BASIC17.34■□□□□ 0.37
RHBDL3P58872 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RHBDL3P58872 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
RHBDL3P58872 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RHBDL3P58872 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
RHBDL3P58872 MIR557-201ENST00000385239 98 ntBASIC17.34■□□□□ 0.37
RHBDL3P58872 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RHBDL3P58872 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
RHBDL3P58872 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RHBDL3P58872 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC17.34■□□□□ 0.37
RHBDL3P58872 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RHBDL3P58872 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
RHBDL3P58872 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RHBDL3P58872 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC17.34■□□□□ 0.37
RHBDL3P58872 AP002353.1-201ENST00000528257 1599 ntBASIC17.34■□□□□ 0.37
RHBDL3P58872 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
RHBDL3P58872 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC17.34■□□□□ 0.37
RHBDL3P58872 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC17.34■□□□□ 0.37
RHBDL3P58872 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
RHBDL3P58872 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RHBDL3P58872 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC17.34■□□□□ 0.37
RHBDL3P58872 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.34■□□□□ 0.37
RHBDL3P58872 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC17.34■□□□□ 0.37
RHBDL3P58872 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RHBDL3P58872 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC17.34■□□□□ 0.37
RHBDL3P58872 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.34■□□□□ 0.37
RHBDL3P58872 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
RHBDL3P58872 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
RHBDL3P58872 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RHBDL3P58872 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RHBDL3P58872 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RHBDL3P58872 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RHBDL3P58872 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.33■□□□□ 0.37
RHBDL3P58872 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
RHBDL3P58872 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
RHBDL3P58872 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC17.33■□□□□ 0.37
RHBDL3P58872 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RHBDL3P58872 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
RHBDL3P58872 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
RHBDL3P58872 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
RHBDL3P58872 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RHBDL3P58872 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RHBDL3P58872 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
RHBDL3P58872 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.33■□□□□ 0.37
RHBDL3P58872 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
RHBDL3P58872 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
RHBDL3P58872 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RHBDL3P58872 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC17.33■□□□□ 0.36
RHBDL3P58872 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RHBDL3P58872 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
RHBDL3P58872 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms