Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CLDN12P56749 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.02□□□□□ -0.33
CLDN12P56749 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC13.02□□□□□ -0.33
CLDN12P56749 PEG13-201ENST00000631594 5667 ntBASIC13.02□□□□□ -0.33
CLDN12P56749 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CLDN12P56749 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CLDN12P56749 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CLDN12P56749 MIR497HG-202ENST00000572453 3838 ntBASIC13.02□□□□□ -0.33
CLDN12P56749 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.02□□□□□ -0.33
CLDN12P56749 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CLDN12P56749 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CLDN12P56749 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
CLDN12P56749 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CLDN12P56749 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC13.02□□□□□ -0.33
CLDN12P56749 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
CLDN12P56749 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
CLDN12P56749 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
CLDN12P56749 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.01□□□□□ -0.33
CLDN12P56749 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.01□□□□□ -0.33
CLDN12P56749 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN12P56749 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN12P56749 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.01□□□□□ -0.33
CLDN12P56749 AL359183.1-201ENST00000623796 2132 ntBASIC13.01□□□□□ -0.33
CLDN12P56749 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN12P56749 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.01□□□□□ -0.33
CLDN12P56749 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN12P56749 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN12P56749 AL122018.1-201ENST00000446607 2310 ntBASIC13.01□□□□□ -0.33
CLDN12P56749 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC13.01□□□□□ -0.33
CLDN12P56749 FAM90A12P-201ENST00000519497 2375 ntBASIC13.01□□□□□ -0.33
CLDN12P56749 FAM90A24P-201ENST00000520792 2369 ntBASIC13.01□□□□□ -0.33
CLDN12P56749 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN12P56749 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CLDN12P56749 AC138969.2-201ENST00000532739 9932 ntBASIC13.01□□□□□ -0.33
CLDN12P56749 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN12P56749 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC13.01□□□□□ -0.33
CLDN12P56749 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
CLDN12P56749 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN12P56749 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN12P56749 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN12P56749 RPL37AP1-201ENST00000412502 279 ntBASIC13.01□□□□□ -0.33
CLDN12P56749 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN12P56749 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
CLDN12P56749 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN12P56749 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
CLDN12P56749 SATB1-217ENST00000493952 626 ntTSL 3 BASIC13.01□□□□□ -0.33
CLDN12P56749 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.01□□□□□ -0.33
CLDN12P56749 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.01□□□□□ -0.33
CLDN12P56749 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC13.01□□□□□ -0.33
CLDN12P56749 AC074044.1-201ENST00000609673 707 ntBASIC13.01□□□□□ -0.33
CLDN12P56749 AL513210.1-201ENST00000629608 234 ntBASIC13.01□□□□□ -0.33
CLDN12P56749 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.01□□□□□ -0.33
CLDN12P56749 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC13.01□□□□□ -0.33
CLDN12P56749 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN12P56749 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.01□□□□□ -0.33
CLDN12P56749 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
CLDN12P56749 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN12P56749 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN12P56749 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.01□□□□□ -0.33
CLDN12P56749 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC13.01□□□□□ -0.33
CLDN12P56749 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CLDN12P56749 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN12P56749 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN12P56749 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN12P56749 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN12P56749 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
CLDN12P56749 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN12P56749 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
CLDN12P56749 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN12P56749 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN12P56749 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
CLDN12P56749 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CLDN12P56749 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
CLDN12P56749 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
CLDN12P56749 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CLDN12P56749 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLDN12P56749 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CLDN12P56749 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
CLDN12P56749 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CLDN12P56749 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CLDN12P56749 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC13□□□□□ -0.33
CLDN12P56749 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLDN12P56749 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CLDN12P56749 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CLDN12P56749 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLDN12P56749 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
CLDN12P56749 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
CLDN12P56749 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13□□□□□ -0.33
CLDN12P56749 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13□□□□□ -0.33
CLDN12P56749 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CLDN12P56749 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC13□□□□□ -0.33
CLDN12P56749 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC13□□□□□ -0.33
CLDN12P56749 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CLDN12P56749 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
CLDN12P56749 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13□□□□□ -0.33
CLDN12P56749 PMP22-202ENST00000395936 816 ntTSL 3 BASIC13□□□□□ -0.33
CLDN12P56749 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC13□□□□□ -0.33
CLDN12P56749 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
CLDN12P56749 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC13□□□□□ -0.33
CLDN12P56749 IMP4-203ENST00000409935 958 ntTSL 5 BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms