Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
CMC4P56277 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CMC4P56277 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
CMC4P56277 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC11.08□□□□□ -0.64
CMC4P56277 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CMC4P56277 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CMC4P56277 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC11.08□□□□□ -0.64
CMC4P56277 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CMC4P56277 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
CMC4P56277 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CMC4P56277 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CMC4P56277 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC11.08□□□□□ -0.64
CMC4P56277 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC11.08□□□□□ -0.64
CMC4P56277 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
CMC4P56277 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
CMC4P56277 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
CMC4P56277 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
CMC4P56277 AC026954.1-201ENST00000429771 1293 ntBASIC11.08□□□□□ -0.64
CMC4P56277 PUDPP3-201ENST00000445368 636 ntBASIC11.08□□□□□ -0.64
CMC4P56277 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CMC4P56277 AL590640.2-201ENST00000457038 527 ntBASIC11.08□□□□□ -0.64
CMC4P56277 PFN2-215ENST00000497148 743 ntTSL 4 BASIC11.08□□□□□ -0.64
CMC4P56277 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC11.08□□□□□ -0.64
CMC4P56277 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC11.08□□□□□ -0.64
CMC4P56277 EEF1DP1-201ENST00000585891 896 ntBASIC11.08□□□□□ -0.64
CMC4P56277 AC027601.3-201ENST00000622907 509 ntBASIC11.08□□□□□ -0.64
CMC4P56277 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CMC4P56277 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CMC4P56277 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CMC4P56277 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC11.08□□□□□ -0.64
CMC4P56277 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CMC4P56277 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
CMC4P56277 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CMC4P56277 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CMC4P56277 MPI-203ENST00000535694 1523 ntTSL 2 BASIC11.08□□□□□ -0.64
CMC4P56277 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC11.08□□□□□ -0.64
CMC4P56277 SF1-209ENST00000433274 2317 ntTSL 2 BASIC11.08□□□□□ -0.64
CMC4P56277 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC11.08□□□□□ -0.64
CMC4P56277 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CMC4P56277 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
CMC4P56277 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CMC4P56277 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CMC4P56277 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC11.08□□□□□ -0.64
CMC4P56277 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC11.08□□□□□ -0.64
CMC4P56277 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CMC4P56277 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CMC4P56277 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CMC4P56277 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CMC4P56277 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CMC4P56277 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
CMC4P56277 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CMC4P56277 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CMC4P56277 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CMC4P56277 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CMC4P56277 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CMC4P56277 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CMC4P56277 AC132872.4-202ENST00000622924 2756 ntBASIC11.07□□□□□ -0.64
CMC4P56277 MECR-202ENST00000373791 2416 ntTSL 2 BASIC11.07□□□□□ -0.64
CMC4P56277 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
CMC4P56277 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CMC4P56277 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC11.07□□□□□ -0.64
CMC4P56277 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
CMC4P56277 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC11.07□□□□□ -0.64
CMC4P56277 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
CMC4P56277 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
CMC4P56277 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
CMC4P56277 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
CMC4P56277 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CMC4P56277 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC11.07□□□□□ -0.64
CMC4P56277 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CMC4P56277 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CMC4P56277 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CMC4P56277 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
CMC4P56277 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CMC4P56277 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CMC4P56277 RBM38-204ENST00000371219 760 ntTSL 2 BASIC11.07□□□□□ -0.64
CMC4P56277 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
CMC4P56277 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
CMC4P56277 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CMC4P56277 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CMC4P56277 BTBD6P1-201ENST00000412176 1267 ntBASIC11.07□□□□□ -0.64
CMC4P56277 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC11.07□□□□□ -0.64
CMC4P56277 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CMC4P56277 RGS5-214ENST00000429865 754 ntTSL 3 BASIC11.07□□□□□ -0.64
CMC4P56277 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC11.07□□□□□ -0.64
CMC4P56277 PFN1P12-201ENST00000455938 534 ntBASIC11.07□□□□□ -0.64
CMC4P56277 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC11.07□□□□□ -0.64
CMC4P56277 CFL1-212ENST00000531413 636 ntTSL 3 BASIC11.07□□□□□ -0.64
CMC4P56277 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CMC4P56277 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CMC4P56277 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC11.07□□□□□ -0.64
CMC4P56277 NAA38-206ENST00000576384 424 ntTSL 2 BASIC11.07□□□□□ -0.64
CMC4P56277 AC004466.1-201ENST00000599515 1080 ntBASIC11.07□□□□□ -0.64
CMC4P56277 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC11.07□□□□□ -0.64
CMC4P56277 AL008721.1-201ENST00000609964 604 ntBASIC11.07□□□□□ -0.64
CMC4P56277 Six3os1_5.1-201ENST00000611000 271 ntBASIC11.07□□□□□ -0.64
CMC4P56277 AL136301.1-201ENST00000615830 422 ntBASIC11.07□□□□□ -0.64
CMC4P56277 AC015818.8-201ENST00000587907 1519 ntBASIC11.07□□□□□ -0.64
CMC4P56277 CILP-201ENST00000261883 5695 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CMC4P56277 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms