Protein–RNA interactions for Protein: P54284

CACNB3, Voltage-dependent L-type calcium channel subunit beta-3, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3P54284 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CACNB3P54284 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
CACNB3P54284 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CACNB3P54284 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CACNB3P54284 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CACNB3P54284 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC17.46■□□□□ 0.39
CACNB3P54284 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CACNB3P54284 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
CACNB3P54284 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CACNB3P54284 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CACNB3P54284 MBP-201ENST00000354542 575 ntTSL 2 BASIC17.46■□□□□ 0.39
CACNB3P54284 RNA5SP359-201ENST00000364838 113 ntBASIC17.46■□□□□ 0.39
CACNB3P54284 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CACNB3P54284 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC17.46■□□□□ 0.39
CACNB3P54284 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CACNB3P54284 RPS9P1-201ENST00000419943 583 ntBASIC17.46■□□□□ 0.39
CACNB3P54284 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC17.46■□□□□ 0.39
CACNB3P54284 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC17.46■□□□□ 0.39
CACNB3P54284 PTPA-215ENST00000432124 567 ntTSL 4 BASIC17.46■□□□□ 0.39
CACNB3P54284 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC17.46■□□□□ 0.39
CACNB3P54284 OR2R1P-201ENST00000441404 914 ntBASIC17.46■□□□□ 0.39
CACNB3P54284 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC17.46■□□□□ 0.39
CACNB3P54284 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CACNB3P54284 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC17.46■□□□□ 0.39
CACNB3P54284 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC17.46■□□□□ 0.39
CACNB3P54284 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CACNB3P54284 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC17.46■□□□□ 0.39
CACNB3P54284 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CACNB3P54284 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CACNB3P54284 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CACNB3P54284 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CACNB3P54284 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CACNB3P54284 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CACNB3P54284 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
CACNB3P54284 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CACNB3P54284 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CACNB3P54284 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CACNB3P54284 CICP6-201ENST00000457191 2729 ntBASIC17.45■□□□□ 0.38
CACNB3P54284 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
CACNB3P54284 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CACNB3P54284 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CACNB3P54284 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CACNB3P54284 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CACNB3P54284 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC17.45■□□□□ 0.38
CACNB3P54284 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CACNB3P54284 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CACNB3P54284 DNAJB1P1-201ENST00000429417 1024 ntBASIC17.45■□□□□ 0.38
CACNB3P54284 TSPY25P-201ENST00000429463 745 ntBASIC17.45■□□□□ 0.38
CACNB3P54284 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CACNB3P54284 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC17.45■□□□□ 0.38
CACNB3P54284 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC17.45■□□□□ 0.38
CACNB3P54284 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC17.45■□□□□ 0.38
CACNB3P54284 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC17.45■□□□□ 0.38
CACNB3P54284 MIR4522-201ENST00000584932 87 ntBASIC17.45■□□□□ 0.38
CACNB3P54284 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC17.45■□□□□ 0.38
CACNB3P54284 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC17.45■□□□□ 0.38
CACNB3P54284 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC17.45■□□□□ 0.38
CACNB3P54284 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CACNB3P54284 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC17.45■□□□□ 0.38
CACNB3P54284 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC17.45■□□□□ 0.38
CACNB3P54284 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CACNB3P54284 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CACNB3P54284 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CACNB3P54284 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CACNB3P54284 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CACNB3P54284 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CACNB3P54284 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CACNB3P54284 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CACNB3P54284 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC17.45■□□□□ 0.38
CACNB3P54284 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CACNB3P54284 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CACNB3P54284 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CACNB3P54284 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CACNB3P54284 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CACNB3P54284 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CACNB3P54284 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CACNB3P54284 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC17.44■□□□□ 0.38
CACNB3P54284 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CACNB3P54284 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CACNB3P54284 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CACNB3P54284 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CACNB3P54284 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CACNB3P54284 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CACNB3P54284 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CACNB3P54284 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CACNB3P54284 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CACNB3P54284 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC17.44■□□□□ 0.38
CACNB3P54284 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CACNB3P54284 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC17.44■□□□□ 0.38
CACNB3P54284 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CACNB3P54284 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC17.44■□□□□ 0.38
CACNB3P54284 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CACNB3P54284 AP000358.1-201ENST00000456260 156 ntBASIC17.44■□□□□ 0.38
CACNB3P54284 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CACNB3P54284 RN7SL8P-201ENST00000461771 266 ntBASIC17.44■□□□□ 0.38
CACNB3P54284 NDUFS6P1-201ENST00000485187 316 ntBASIC17.44■□□□□ 0.38
CACNB3P54284 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC17.44■□□□□ 0.38
CACNB3P54284 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CACNB3P54284 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CACNB3P54284 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms