Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CPT1AP50416 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.33■□□□□ 0.2
CPT1AP50416 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.32■□□□□ 0.2
CPT1AP50416 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.32■□□□□ 0.2
CPT1AP50416 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPT1AP50416 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CPT1AP50416 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPT1AP50416 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPT1AP50416 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPT1AP50416 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.32■□□□□ 0.2
CPT1AP50416 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CPT1AP50416 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPT1AP50416 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CPT1AP50416 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CPT1AP50416 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CPT1AP50416 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPT1AP50416 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC16.32■□□□□ 0.2
CPT1AP50416 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC16.32■□□□□ 0.2
CPT1AP50416 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC16.32■□□□□ 0.2
CPT1AP50416 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC16.32■□□□□ 0.2
CPT1AP50416 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC16.32■□□□□ 0.2
CPT1AP50416 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
CPT1AP50416 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC16.32■□□□□ 0.2
CPT1AP50416 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPT1AP50416 CHCHD2P9-201ENST00000461726 456 ntBASIC16.32■□□□□ 0.2
CPT1AP50416 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CPT1AP50416 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC16.32■□□□□ 0.2
CPT1AP50416 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.32■□□□□ 0.2
CPT1AP50416 AC135983.4-201ENST00000564116 1262 ntBASIC16.32■□□□□ 0.2
CPT1AP50416 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPT1AP50416 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC16.32■□□□□ 0.2
CPT1AP50416 SIGLEC18P-201ENST00000602271 909 ntBASIC16.32■□□□□ 0.2
CPT1AP50416 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CPT1AP50416 AL162727.3-201ENST00000635661 2787 ntBASIC16.32■□□□□ 0.2
CPT1AP50416 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.32■□□□□ 0.2
CPT1AP50416 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC16.32■□□□□ 0.2
CPT1AP50416 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPT1AP50416 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPT1AP50416 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CPT1AP50416 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CPT1AP50416 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CPT1AP50416 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.32■□□□□ 0.2
CPT1AP50416 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CPT1AP50416 AC046158.3-201ENST00000624947 2558 ntBASIC16.32■□□□□ 0.2
CPT1AP50416 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPT1AP50416 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPT1AP50416 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
CPT1AP50416 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CPT1AP50416 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.31■□□□□ 0.2
CPT1AP50416 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPT1AP50416 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
CPT1AP50416 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CPT1AP50416 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPT1AP50416 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPT1AP50416 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPT1AP50416 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPT1AP50416 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.31■□□□□ 0.2
CPT1AP50416 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CPT1AP50416 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPT1AP50416 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CPT1AP50416 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPT1AP50416 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPT1AP50416 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CPT1AP50416 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CPT1AP50416 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC16.31■□□□□ 0.2
CPT1AP50416 RHEB-207ENST00000496004 744 ntTSL 2 BASIC16.31■□□□□ 0.2
CPT1AP50416 AC114947.1-202ENST00000514136 344 ntBASIC16.31■□□□□ 0.2
CPT1AP50416 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC16.31■□□□□ 0.2
CPT1AP50416 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC16.31■□□□□ 0.2
CPT1AP50416 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CPT1AP50416 IGHVIII-5-2-201ENST00000522505 261 ntBASIC16.31■□□□□ 0.2
CPT1AP50416 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC16.31■□□□□ 0.2
CPT1AP50416 AC007326.1-201ENST00000604539 458 ntBASIC16.31■□□□□ 0.2
CPT1AP50416 AC007881.3-201ENST00000608897 607 ntBASIC16.31■□□□□ 0.2
CPT1AP50416 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPT1AP50416 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CPT1AP50416 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPT1AP50416 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.31■□□□□ 0.2
CPT1AP50416 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.31■□□□□ 0.2
CPT1AP50416 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC16.31■□□□□ 0.2
CPT1AP50416 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CPT1AP50416 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPT1AP50416 AC139712.1-201ENST00000378256 1875 ntBASIC16.31■□□□□ 0.2
CPT1AP50416 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CPT1AP50416 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPT1AP50416 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CPT1AP50416 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPT1AP50416 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.31■□□□□ 0.2
CPT1AP50416 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CPT1AP50416 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPT1AP50416 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CPT1AP50416 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPT1AP50416 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CPT1AP50416 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC16.3■□□□□ 0.2
CPT1AP50416 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CPT1AP50416 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CPT1AP50416 KRT8P31-201ENST00000504812 1408 ntBASIC16.3■□□□□ 0.2
CPT1AP50416 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CPT1AP50416 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPT1AP50416 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms