Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLK1P49759 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.12□□□□□ -0.15
CLK1P49759 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLK1P49759 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLK1P49759 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLK1P49759 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLK1P49759 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLK1P49759 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLK1P49759 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CLK1P49759 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLK1P49759 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLK1P49759 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CLK1P49759 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLK1P49759 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLK1P49759 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLK1P49759 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLK1P49759 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLK1P49759 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CLK1P49759 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLK1P49759 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLK1P49759 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.12□□□□□ -0.15
CLK1P49759 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.11□□□□□ -0.15
CLK1P49759 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CLK1P49759 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.11□□□□□ -0.15
CLK1P49759 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
CLK1P49759 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLK1P49759 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.11□□□□□ -0.15
CLK1P49759 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CLK1P49759 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLK1P49759 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.11□□□□□ -0.15
CLK1P49759 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLK1P49759 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
CLK1P49759 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLK1P49759 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.11□□□□□ -0.15
CLK1P49759 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLK1P49759 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLK1P49759 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLK1P49759 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.11□□□□□ -0.15
CLK1P49759 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLK1P49759 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
CLK1P49759 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLK1P49759 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLK1P49759 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLK1P49759 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLK1P49759 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLK1P49759 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.11□□□□□ -0.15
CLK1P49759 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.11□□□□□ -0.15
CLK1P49759 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.11□□□□□ -0.15
CLK1P49759 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.11□□□□□ -0.15
CLK1P49759 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.11□□□□□ -0.15
CLK1P49759 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CLK1P49759 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.11□□□□□ -0.15
CLK1P49759 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.11□□□□□ -0.15
CLK1P49759 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.11□□□□□ -0.15
CLK1P49759 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
CLK1P49759 AC008738.7-201ENST00000609744 511 ntBASIC14.11□□□□□ -0.15
CLK1P49759 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLK1P49759 AC009118.2-201ENST00000613275 655 ntBASIC14.11□□□□□ -0.15
CLK1P49759 AF228730.6-201ENST00000641497 218 ntBASIC14.11□□□□□ -0.15
CLK1P49759 AC084121.3-201ENST00000641716 218 ntBASIC14.11□□□□□ -0.15
CLK1P49759 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC14.11□□□□□ -0.15
CLK1P49759 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLK1P49759 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLK1P49759 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
CLK1P49759 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLK1P49759 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLK1P49759 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLK1P49759 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.11□□□□□ -0.15
CLK1P49759 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLK1P49759 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CLK1P49759 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC14.11□□□□□ -0.15
CLK1P49759 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLK1P49759 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.11□□□□□ -0.15
CLK1P49759 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLK1P49759 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.11□□□□□ -0.15
CLK1P49759 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.1□□□□□ -0.15
CLK1P49759 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLK1P49759 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
CLK1P49759 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLK1P49759 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.1□□□□□ -0.15
CLK1P49759 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CLK1P49759 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLK1P49759 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
CLK1P49759 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.1□□□□□ -0.15
CLK1P49759 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CLK1P49759 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLK1P49759 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CLK1P49759 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLK1P49759 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CLK1P49759 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLK1P49759 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLK1P49759 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.1□□□□□ -0.15
CLK1P49759 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.1□□□□□ -0.15
CLK1P49759 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLK1P49759 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLK1P49759 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CLK1P49759 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLK1P49759 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLK1P49759 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLK1P49759 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms