Protein–RNA interactions for Protein: P43354

NR4A2, Nuclear receptor subfamily 4 group A member 2, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A2P43354 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NR4A2P43354 AC004899.2-201ENST00000622993 3860 ntBASIC13.66□□□□□ -0.22
NR4A2P43354 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
NR4A2P43354 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
NR4A2P43354 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NR4A2P43354 AC130686.1-201ENST00000622936 2466 ntBASIC13.66□□□□□ -0.22
NR4A2P43354 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NR4A2P43354 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NR4A2P43354 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
NR4A2P43354 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
NR4A2P43354 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC13.66□□□□□ -0.22
NR4A2P43354 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC13.66□□□□□ -0.22
NR4A2P43354 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NR4A2P43354 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
NR4A2P43354 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.65□□□□□ -0.22
NR4A2P43354 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.65□□□□□ -0.22
NR4A2P43354 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NR4A2P43354 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC13.65□□□□□ -0.22
NR4A2P43354 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
NR4A2P43354 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
NR4A2P43354 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.65□□□□□ -0.22
NR4A2P43354 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
NR4A2P43354 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
NR4A2P43354 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
NR4A2P43354 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
NR4A2P43354 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC13.65□□□□□ -0.22
NR4A2P43354 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NR4A2P43354 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
NR4A2P43354 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
NR4A2P43354 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NR4A2P43354 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
NR4A2P43354 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NR4A2P43354 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
NR4A2P43354 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NR4A2P43354 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.65□□□□□ -0.22
NR4A2P43354 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.65□□□□□ -0.22
NR4A2P43354 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
NR4A2P43354 AL080243.2-201ENST00000418783 582 ntBASIC13.65□□□□□ -0.22
NR4A2P43354 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC13.65□□□□□ -0.22
NR4A2P43354 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC13.65□□□□□ -0.22
NR4A2P43354 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
NR4A2P43354 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC13.65□□□□□ -0.22
NR4A2P43354 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NR4A2P43354 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.65□□□□□ -0.22
NR4A2P43354 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.65□□□□□ -0.22
NR4A2P43354 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.65□□□□□ -0.22
NR4A2P43354 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC13.65□□□□□ -0.22
NR4A2P43354 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC13.65□□□□□ -0.22
NR4A2P43354 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.65□□□□□ -0.22
NR4A2P43354 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
NR4A2P43354 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
NR4A2P43354 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NR4A2P43354 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NR4A2P43354 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NR4A2P43354 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.65□□□□□ -0.22
NR4A2P43354 AC007541.1-201ENST00000570282 1469 ntBASIC13.65□□□□□ -0.22
NR4A2P43354 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC13.65□□□□□ -0.22
NR4A2P43354 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC13.65□□□□□ -0.22
NR4A2P43354 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NR4A2P43354 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NR4A2P43354 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NR4A2P43354 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NR4A2P43354 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NR4A2P43354 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NR4A2P43354 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
NR4A2P43354 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
NR4A2P43354 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NR4A2P43354 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.65□□□□□ -0.22
NR4A2P43354 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NR4A2P43354 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
NR4A2P43354 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
NR4A2P43354 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NR4A2P43354 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
NR4A2P43354 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
NR4A2P43354 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.64□□□□□ -0.23
NR4A2P43354 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NR4A2P43354 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.64□□□□□ -0.23
NR4A2P43354 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.64□□□□□ -0.23
NR4A2P43354 AC152010.1-201ENST00000415779 2006 ntBASIC13.64□□□□□ -0.23
NR4A2P43354 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.64□□□□□ -0.23
NR4A2P43354 AMT-221ENST00000538581 2038 ntTSL 2 BASIC13.64□□□□□ -0.23
NR4A2P43354 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC13.64□□□□□ -0.23
NR4A2P43354 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
NR4A2P43354 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
NR4A2P43354 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
NR4A2P43354 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NR4A2P43354 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NR4A2P43354 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NR4A2P43354 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NR4A2P43354 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NR4A2P43354 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
NR4A2P43354 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NR4A2P43354 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
NR4A2P43354 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
NR4A2P43354 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NR4A2P43354 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.64□□□□□ -0.23
NR4A2P43354 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
NR4A2P43354 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
NR4A2P43354 BTBD7P1-201ENST00000447253 1453 ntBASIC13.64□□□□□ -0.23
NR4A2P43354 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms