Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
GDNFP39905 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
GDNFP39905 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
GDNFP39905 Z82170.1-201ENST00000625081 3192 ntBASIC13.04□□□□□ -0.32
GDNFP39905 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC13.04□□□□□ -0.32
GDNFP39905 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
GDNFP39905 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
GDNFP39905 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
GDNFP39905 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
GDNFP39905 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
GDNFP39905 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
GDNFP39905 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
GDNFP39905 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
GDNFP39905 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
GDNFP39905 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.04□□□□□ -0.32
GDNFP39905 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
GDNFP39905 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
GDNFP39905 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
GDNFP39905 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC13.04□□□□□ -0.32
GDNFP39905 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
GDNFP39905 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.04□□□□□ -0.32
GDNFP39905 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
GDNFP39905 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
GDNFP39905 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
GDNFP39905 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
GDNFP39905 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
GDNFP39905 TREML5P-201ENST00000421694 576 ntBASIC13.04□□□□□ -0.32
GDNFP39905 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC13.04□□□□□ -0.32
GDNFP39905 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
GDNFP39905 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC13.04□□□□□ -0.32
GDNFP39905 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
GDNFP39905 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC13.04□□□□□ -0.32
GDNFP39905 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC13.04□□□□□ -0.32
GDNFP39905 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
GDNFP39905 GPER1-207ENST00000619052 571 ntTSL 2 BASIC13.04□□□□□ -0.32
GDNFP39905 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
GDNFP39905 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC13.04□□□□□ -0.32
GDNFP39905 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
GDNFP39905 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
GDNFP39905 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
GDNFP39905 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
GDNFP39905 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
GDNFP39905 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
GDNFP39905 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
GDNFP39905 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
GDNFP39905 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
GDNFP39905 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
GDNFP39905 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC13.04□□□□□ -0.32
GDNFP39905 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.04□□□□□ -0.32
GDNFP39905 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
GDNFP39905 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
GDNFP39905 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.04□□□□□ -0.32
GDNFP39905 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC13.04□□□□□ -0.32
GDNFP39905 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
GDNFP39905 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
GDNFP39905 LILRP1-201ENST00000444199 1370 ntBASIC13.04□□□□□ -0.32
GDNFP39905 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.04□□□□□ -0.32
GDNFP39905 INVS-201ENST00000262456 2968 ntTSL 5 BASIC13.04□□□□□ -0.32
GDNFP39905 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
GDNFP39905 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC13.04□□□□□ -0.32
GDNFP39905 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
GDNFP39905 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
GDNFP39905 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
GDNFP39905 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
GDNFP39905 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
GDNFP39905 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
GDNFP39905 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC13.04□□□□□ -0.32
GDNFP39905 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
GDNFP39905 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
GDNFP39905 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
GDNFP39905 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
GDNFP39905 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
GDNFP39905 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
GDNFP39905 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
GDNFP39905 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC13.03□□□□□ -0.32
GDNFP39905 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
GDNFP39905 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
GDNFP39905 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
GDNFP39905 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
GDNFP39905 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
GDNFP39905 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
GDNFP39905 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
GDNFP39905 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
GDNFP39905 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
GDNFP39905 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
GDNFP39905 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
GDNFP39905 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
GDNFP39905 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
GDNFP39905 BAD-202ENST00000394531 631 ntTSL 3 BASIC13.03□□□□□ -0.32
GDNFP39905 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13.03□□□□□ -0.32
GDNFP39905 AC104457.1-201ENST00000401024 814 ntBASIC13.03□□□□□ -0.32
GDNFP39905 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC13.03□□□□□ -0.32
GDNFP39905 AC092580.3-201ENST00000430932 139 ntBASIC13.03□□□□□ -0.32
GDNFP39905 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
GDNFP39905 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.03□□□□□ -0.32
GDNFP39905 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC13.03□□□□□ -0.32
GDNFP39905 BAD-207ENST00000544785 525 ntTSL 3 BASIC13.03□□□□□ -0.32
GDNFP39905 AL512361.1-201ENST00000554200 418 ntBASIC13.03□□□□□ -0.32
GDNFP39905 DUX4L27-201ENST00000554796 1261 ntBASIC13.03□□□□□ -0.32
GDNFP39905 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms