Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CXCL3P19876 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CXCL3P19876 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
CXCL3P19876 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
CXCL3P19876 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CXCL3P19876 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CXCL3P19876 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
CXCL3P19876 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
CXCL3P19876 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CXCL3P19876 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
CXCL3P19876 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC12.51□□□□□ -0.41
CXCL3P19876 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC12.51□□□□□ -0.41
CXCL3P19876 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC12.51□□□□□ -0.41
CXCL3P19876 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC12.51□□□□□ -0.41
CXCL3P19876 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC12.51□□□□□ -0.41
CXCL3P19876 POLD4-207ENST00000531239 584 ntTSL 2 BASIC12.51□□□□□ -0.41
CXCL3P19876 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC12.51□□□□□ -0.41
CXCL3P19876 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC12.51□□□□□ -0.41
CXCL3P19876 AC015910.1-201ENST00000579400 975 ntBASIC12.51□□□□□ -0.41
CXCL3P19876 SPIB-207ENST00000597855 564 ntTSL 4 BASIC12.51□□□□□ -0.41
CXCL3P19876 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CXCL3P19876 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CXCL3P19876 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
CXCL3P19876 AC012313.10-201ENST00000623509 926 ntBASIC12.51□□□□□ -0.41
CXCL3P19876 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CXCL3P19876 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
CXCL3P19876 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
CXCL3P19876 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CXCL3P19876 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
CXCL3P19876 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CXCL3P19876 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC12.51□□□□□ -0.41
CXCL3P19876 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC12.51□□□□□ -0.41
CXCL3P19876 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC12.51□□□□□ -0.41
CXCL3P19876 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC12.51□□□□□ -0.41
CXCL3P19876 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC12.51□□□□□ -0.41
CXCL3P19876 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
CXCL3P19876 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CXCL3P19876 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC12.51□□□□□ -0.41
CXCL3P19876 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CXCL3P19876 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC12.5□□□□□ -0.41
CXCL3P19876 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC12.5□□□□□ -0.41
CXCL3P19876 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CXCL3P19876 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
CXCL3P19876 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CXCL3P19876 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CXCL3P19876 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CXCL3P19876 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CXCL3P19876 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
CXCL3P19876 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC12.5□□□□□ -0.41
CXCL3P19876 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC12.5□□□□□ -0.41
CXCL3P19876 AC138969.2-201ENST00000532739 9932 ntBASIC12.5□□□□□ -0.41
CXCL3P19876 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CXCL3P19876 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC12.5□□□□□ -0.41
CXCL3P19876 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
CXCL3P19876 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CXCL3P19876 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
CXCL3P19876 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CXCL3P19876 INIP-202ENST00000374236 874 ntTSL 2 BASIC12.5□□□□□ -0.41
CXCL3P19876 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC12.5□□□□□ -0.41
CXCL3P19876 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC12.5□□□□□ -0.41
CXCL3P19876 RNA5SP410-201ENST00000516285 106 ntBASIC12.5□□□□□ -0.41
CXCL3P19876 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC12.5□□□□□ -0.41
CXCL3P19876 PENK-208ENST00000523051 772 ntTSL 5 BASIC12.5□□□□□ -0.41
CXCL3P19876 TOLLIP-AS1-201ENST00000530897 939 ntBASIC12.5□□□□□ -0.41
CXCL3P19876 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC12.5□□□□□ -0.41
CXCL3P19876 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CXCL3P19876 UBL5-208ENST00000593087 320 ntTSL 3 BASIC12.5□□□□□ -0.41
CXCL3P19876 AL356488.2-201ENST00000602755 427 ntBASIC12.5□□□□□ -0.41
CXCL3P19876 AC025181.2-201ENST00000606994 802 ntBASIC12.5□□□□□ -0.41
CXCL3P19876 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC12.5□□□□□ -0.41
CXCL3P19876 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC12.5□□□□□ -0.41
CXCL3P19876 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
CXCL3P19876 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
CXCL3P19876 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
CXCL3P19876 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
CXCL3P19876 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
CXCL3P19876 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CXCL3P19876 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC12.5□□□□□ -0.41
CXCL3P19876 AP3S2-216ENST00000617003 1561 ntBASIC12.5□□□□□ -0.41
CXCL3P19876 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC12.5□□□□□ -0.41
CXCL3P19876 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CXCL3P19876 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
CXCL3P19876 AC215219.1-201ENST00000400706 1817 ntBASIC12.5□□□□□ -0.41
CXCL3P19876 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
CXCL3P19876 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CXCL3P19876 AC107375.1-201ENST00000564464 2231 ntBASIC12.5□□□□□ -0.41
CXCL3P19876 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
CXCL3P19876 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC12.5□□□□□ -0.41
CXCL3P19876 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC12.5□□□□□ -0.41
CXCL3P19876 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CXCL3P19876 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC12.5□□□□□ -0.41
CXCL3P19876 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CXCL3P19876 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CXCL3P19876 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CXCL3P19876 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CXCL3P19876 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CXCL3P19876 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC12.5□□□□□ -0.41
CXCL3P19876 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CXCL3P19876 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
CXCL3P19876 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms