Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.32■□□□□ 0.04
ERCC2P18074 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ERCC2P18074 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ERCC2P18074 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.32■□□□□ 0.04
ERCC2P18074 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ERCC2P18074 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC15.32■□□□□ 0.04
ERCC2P18074 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ERCC2P18074 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ERCC2P18074 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ERCC2P18074 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ERCC2P18074 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
ERCC2P18074 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC15.31■□□□□ 0.04
ERCC2P18074 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.31■□□□□ 0.04
ERCC2P18074 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ERCC2P18074 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
ERCC2P18074 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ERCC2P18074 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ERCC2P18074 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.31■□□□□ 0.04
ERCC2P18074 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ERCC2P18074 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
ERCC2P18074 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ERCC2P18074 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ERCC2P18074 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.31■□□□□ 0.04
ERCC2P18074 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ERCC2P18074 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ERCC2P18074 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ERCC2P18074 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.31■□□□□ 0.04
ERCC2P18074 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.31■□□□□ 0.04
ERCC2P18074 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ERCC2P18074 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC15.31■□□□□ 0.04
ERCC2P18074 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
ERCC2P18074 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.31■□□□□ 0.04
ERCC2P18074 KLF2P4-201ENST00000451959 1225 ntBASIC15.31■□□□□ 0.04
ERCC2P18074 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ERCC2P18074 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ERCC2P18074 COX5BP1-201ENST00000507622 393 ntBASIC15.31■□□□□ 0.04
ERCC2P18074 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.31■□□□□ 0.04
ERCC2P18074 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.31■□□□□ 0.04
ERCC2P18074 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ERCC2P18074 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC15.31■□□□□ 0.04
ERCC2P18074 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ERCC2P18074 AC073413.1-201ENST00000603927 732 ntBASIC15.31■□□□□ 0.04
ERCC2P18074 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.31■□□□□ 0.04
ERCC2P18074 RPS24-214ENST00000613865 538 ntTSL 5 BASIC15.31■□□□□ 0.04
ERCC2P18074 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC15.31■□□□□ 0.04
ERCC2P18074 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ERCC2P18074 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ERCC2P18074 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.31■□□□□ 0.04
ERCC2P18074 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.31■□□□□ 0.04
ERCC2P18074 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.31■□□□□ 0.04
ERCC2P18074 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ERCC2P18074 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ERCC2P18074 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ERCC2P18074 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.31■□□□□ 0.04
ERCC2P18074 BX640514.1-201ENST00000583223 1918 ntBASIC15.31■□□□□ 0.04
ERCC2P18074 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ERCC2P18074 MIR600HG-201ENST00000449175 5984 ntBASIC15.31■□□□□ 0.04
ERCC2P18074 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
ERCC2P18074 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
ERCC2P18074 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
ERCC2P18074 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ERCC2P18074 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ERCC2P18074 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ERCC2P18074 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
ERCC2P18074 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.31■□□□□ 0.04
ERCC2P18074 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ERCC2P18074 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.3■□□□□ 0.04
ERCC2P18074 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ERCC2P18074 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC15.3■□□□□ 0.04
ERCC2P18074 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.3■□□□□ 0.04
ERCC2P18074 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ERCC2P18074 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ERCC2P18074 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
ERCC2P18074 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ERCC2P18074 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ERCC2P18074 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ERCC2P18074 ANKRD19P-201ENST00000338192 862 ntBASIC15.3■□□□□ 0.04
ERCC2P18074 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ERCC2P18074 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ERCC2P18074 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
ERCC2P18074 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ERCC2P18074 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
ERCC2P18074 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
ERCC2P18074 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ERCC2P18074 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
ERCC2P18074 MIR1909-201ENST00000411312 80 ntBASIC15.3■□□□□ 0.04
ERCC2P18074 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ERCC2P18074 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC15.3■□□□□ 0.04
ERCC2P18074 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15.3■□□□□ 0.04
ERCC2P18074 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.3■□□□□ 0.04
ERCC2P18074 AC026954.1-201ENST00000429771 1293 ntBASIC15.3■□□□□ 0.04
ERCC2P18074 AHCYP2-201ENST00000430630 1300 ntBASIC15.3■□□□□ 0.04
ERCC2P18074 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
ERCC2P18074 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.3■□□□□ 0.04
ERCC2P18074 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
ERCC2P18074 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
ERCC2P18074 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ERCC2P18074 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC15.3■□□□□ 0.04
ERCC2P18074 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15.3■□□□□ 0.04
ERCC2P18074 ACA64.2-201ENST00000459014 129 ntBASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms