Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CTPS1P17812 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CTPS1P17812 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CTPS1P17812 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CTPS1P17812 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.98□□□□□ -0.01
CTPS1P17812 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CTPS1P17812 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.98□□□□□ -0.01
CTPS1P17812 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CTPS1P17812 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CTPS1P17812 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CTPS1P17812 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CTPS1P17812 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CTPS1P17812 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CTPS1P17812 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CTPS1P17812 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CTPS1P17812 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CTPS1P17812 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CTPS1P17812 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CTPS1P17812 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CTPS1P17812 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
CTPS1P17812 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CTPS1P17812 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CTPS1P17812 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CTPS1P17812 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.98□□□□□ -0.01
CTPS1P17812 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CTPS1P17812 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CTPS1P17812 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CTPS1P17812 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CTPS1P17812 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CTPS1P17812 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.98□□□□□ -0.01
CTPS1P17812 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC14.98□□□□□ -0.01
CTPS1P17812 TLE1P1-201ENST00000422965 589 ntBASIC14.98□□□□□ -0.01
CTPS1P17812 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC14.98□□□□□ -0.01
CTPS1P17812 RGS5-214ENST00000429865 754 ntTSL 3 BASIC14.98□□□□□ -0.01
CTPS1P17812 RPS2P32-201ENST00000439199 892 ntBASIC14.98□□□□□ -0.01
CTPS1P17812 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC14.98□□□□□ -0.01
CTPS1P17812 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CTPS1P17812 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14.98□□□□□ -0.01
CTPS1P17812 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC14.98□□□□□ -0.01
CTPS1P17812 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CTPS1P17812 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14.98□□□□□ -0.01
CTPS1P17812 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
CTPS1P17812 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CTPS1P17812 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CTPS1P17812 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CTPS1P17812 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CTPS1P17812 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CTPS1P17812 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
CTPS1P17812 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CTPS1P17812 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CTPS1P17812 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.98□□□□□ -0.01
CTPS1P17812 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CTPS1P17812 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CTPS1P17812 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CTPS1P17812 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.98□□□□□ -0.01
CTPS1P17812 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
CTPS1P17812 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
CTPS1P17812 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CTPS1P17812 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.97□□□□□ -0.01
CTPS1P17812 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CTPS1P17812 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CTPS1P17812 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
CTPS1P17812 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CTPS1P17812 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CTPS1P17812 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CTPS1P17812 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CTPS1P17812 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
CTPS1P17812 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CTPS1P17812 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CTPS1P17812 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CTPS1P17812 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CTPS1P17812 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
CTPS1P17812 AC007292.2-201ENST00000593524 1812 ntBASIC14.97□□□□□ -0.01
CTPS1P17812 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CTPS1P17812 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CTPS1P17812 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CTPS1P17812 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CTPS1P17812 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CTPS1P17812 FAM45BP-202ENST00000592932 1624 ntBASIC14.97□□□□□ -0.01
CTPS1P17812 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CTPS1P17812 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.97□□□□□ -0.01
CTPS1P17812 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC14.97□□□□□ -0.01
CTPS1P17812 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CTPS1P17812 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CTPS1P17812 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
CTPS1P17812 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CTPS1P17812 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC14.97□□□□□ -0.01
CTPS1P17812 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC14.97□□□□□ -0.01
CTPS1P17812 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC14.97□□□□□ -0.01
CTPS1P17812 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC14.97□□□□□ -0.01
CTPS1P17812 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CTPS1P17812 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC14.97□□□□□ -0.01
CTPS1P17812 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC14.97□□□□□ -0.01
CTPS1P17812 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CTPS1P17812 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CTPS1P17812 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.97□□□□□ -0.01
CTPS1P17812 AC002472.3-201ENST00000640124 621 ntBASIC14.97□□□□□ -0.01
CTPS1P17812 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CTPS1P17812 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.97□□□□□ -0.01
CTPS1P17812 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms