Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMPD1P17405 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMPD1P17405 AL355334.1-201ENST00000417713 215 ntBASIC16.35■□□□□ 0.21
SMPD1P17405 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC16.35■□□□□ 0.21
SMPD1P17405 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC16.35■□□□□ 0.21
SMPD1P17405 ST13P19-201ENST00000442505 1124 ntBASIC16.35■□□□□ 0.21
SMPD1P17405 SERPINA7P1-201ENST00000443077 631 ntBASIC16.35■□□□□ 0.21
SMPD1P17405 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SMPD1P17405 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC16.35■□□□□ 0.21
SMPD1P17405 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
SMPD1P17405 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SMPD1P17405 AC079112.1-201ENST00000454972 939 ntBASIC16.35■□□□□ 0.21
SMPD1P17405 FTH1P22-201ENST00000456305 520 ntBASIC16.35■□□□□ 0.21
SMPD1P17405 CHCHD2P9-201ENST00000461726 456 ntBASIC16.35■□□□□ 0.21
SMPD1P17405 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SMPD1P17405 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC16.35■□□□□ 0.21
SMPD1P17405 AC114947.1-202ENST00000514136 344 ntBASIC16.35■□□□□ 0.21
SMPD1P17405 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC16.35■□□□□ 0.21
SMPD1P17405 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC16.35■□□□□ 0.21
SMPD1P17405 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC16.35■□□□□ 0.21
SMPD1P17405 MIR4649-201ENST00000582839 64 ntBASIC16.35■□□□□ 0.21
SMPD1P17405 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMPD1P17405 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMPD1P17405 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMPD1P17405 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
SMPD1P17405 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
SMPD1P17405 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMPD1P17405 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMPD1P17405 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.35■□□□□ 0.21
SMPD1P17405 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
SMPD1P17405 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SMPD1P17405 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SMPD1P17405 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SMPD1P17405 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMPD1P17405 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
SMPD1P17405 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
SMPD1P17405 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMPD1P17405 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMPD1P17405 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.34■□□□□ 0.21
SMPD1P17405 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMPD1P17405 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SMPD1P17405 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMPD1P17405 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC16.34■□□□□ 0.21
SMPD1P17405 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMPD1P17405 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC16.34■□□□□ 0.21
SMPD1P17405 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC16.34■□□□□ 0.21
SMPD1P17405 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMPD1P17405 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SMPD1P17405 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SMPD1P17405 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC16.34■□□□□ 0.21
SMPD1P17405 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC16.34■□□□□ 0.21
SMPD1P17405 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC16.34■□□□□ 0.21
SMPD1P17405 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC16.34■□□□□ 0.21
SMPD1P17405 RN7SL530P-201ENST00000485097 298 ntBASIC16.34■□□□□ 0.21
SMPD1P17405 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC16.34■□□□□ 0.21
SMPD1P17405 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC16.34■□□□□ 0.21
SMPD1P17405 AC124068.2-201ENST00000569473 1109 ntBASIC16.34■□□□□ 0.21
SMPD1P17405 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
SMPD1P17405 CMC2-224ENST00000630396 481 ntTSL 5 BASIC16.34■□□□□ 0.21
SMPD1P17405 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
SMPD1P17405 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMPD1P17405 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.34■□□□□ 0.21
SMPD1P17405 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SMPD1P17405 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.34■□□□□ 0.21
SMPD1P17405 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
SMPD1P17405 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC16.34■□□□□ 0.21
SMPD1P17405 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
SMPD1P17405 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SMPD1P17405 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SMPD1P17405 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.34■□□□□ 0.21
SMPD1P17405 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMPD1P17405 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMPD1P17405 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SMPD1P17405 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16.34■□□□□ 0.21
SMPD1P17405 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SMPD1P17405 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
SMPD1P17405 CICP6-201ENST00000457191 2729 ntBASIC16.33■□□□□ 0.21
SMPD1P17405 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SMPD1P17405 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC16.33■□□□□ 0.21
SMPD1P17405 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SMPD1P17405 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
SMPD1P17405 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SMPD1P17405 AL109954.1-202ENST00000564051 2148 ntBASIC16.33■□□□□ 0.21
SMPD1P17405 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMPD1P17405 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMPD1P17405 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.33■□□□□ 0.2
SMPD1P17405 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.33■□□□□ 0.2
SMPD1P17405 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.33■□□□□ 0.2
SMPD1P17405 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SMPD1P17405 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMPD1P17405 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC16.33■□□□□ 0.2
SMPD1P17405 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
SMPD1P17405 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMPD1P17405 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC16.33■□□□□ 0.2
SMPD1P17405 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC16.33■□□□□ 0.2
SMPD1P17405 MRPL22P1-201ENST00000505398 616 ntBASIC16.33■□□□□ 0.2
SMPD1P17405 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC16.33■□□□□ 0.2
SMPD1P17405 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC16.33■□□□□ 0.2
SMPD1P17405 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
SMPD1P17405 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms