Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
TOP2AP11388 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
TOP2AP11388 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
TOP2AP11388 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
TOP2AP11388 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
TOP2AP11388 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
TOP2AP11388 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC25.16■■□□□ 1.62
TOP2AP11388 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
TOP2AP11388 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
TOP2AP11388 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
TOP2AP11388 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
TOP2AP11388 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC25.16■■□□□ 1.62
TOP2AP11388 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC25.16■■□□□ 1.62
TOP2AP11388 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC25.16■■□□□ 1.62
TOP2AP11388 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC25.16■■□□□ 1.62
TOP2AP11388 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC25.16■■□□□ 1.62
TOP2AP11388 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC25.16■■□□□ 1.62
TOP2AP11388 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
TOP2AP11388 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
TOP2AP11388 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC25.16■■□□□ 1.62
TOP2AP11388 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC25.16■■□□□ 1.62
TOP2AP11388 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC25.15■■□□□ 1.62
TOP2AP11388 AC215219.1-201ENST00000400706 1817 ntBASIC25.15■■□□□ 1.62
TOP2AP11388 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC25.15■■□□□ 1.62
TOP2AP11388 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
TOP2AP11388 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
TOP2AP11388 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
TOP2AP11388 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
TOP2AP11388 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
TOP2AP11388 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC25.15■■□□□ 1.62
TOP2AP11388 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC25.15■■□□□ 1.62
TOP2AP11388 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC25.15■■□□□ 1.62
TOP2AP11388 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC25.15■■□□□ 1.62
TOP2AP11388 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC25.15■■□□□ 1.62
TOP2AP11388 FAM86B3P-203ENST00000523992 854 ntBASIC25.15■■□□□ 1.62
TOP2AP11388 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC25.15■■□□□ 1.62
TOP2AP11388 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC25.15■■□□□ 1.62
TOP2AP11388 RN7SL556P-201ENST00000582856 298 ntBASIC25.15■■□□□ 1.62
TOP2AP11388 GAS7-216ENST00000583882 553 ntTSL 5 BASIC25.15■■□□□ 1.62
TOP2AP11388 MIR6074-201ENST00000612054 107 ntBASIC25.15■■□□□ 1.62
TOP2AP11388 AJ011931.1-201ENST00000618749 2492 ntBASIC25.15■■□□□ 1.62
TOP2AP11388 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
TOP2AP11388 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
TOP2AP11388 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC25.15■■□□□ 1.62
TOP2AP11388 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC25.15■■□□□ 1.62
TOP2AP11388 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC25.15■■□□□ 1.62
TOP2AP11388 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
TOP2AP11388 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC25.15■■□□□ 1.62
TOP2AP11388 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
TOP2AP11388 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
TOP2AP11388 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
TOP2AP11388 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.62
TOP2AP11388 PDXDC2P-206ENST00000534700 1315 ntBASIC25.14■■□□□ 1.62
TOP2AP11388 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
TOP2AP11388 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.62
TOP2AP11388 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC25.14■■□□□ 1.62
TOP2AP11388 VENTXP3-201ENST00000546480 773 ntBASIC25.14■■□□□ 1.62
TOP2AP11388 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
TOP2AP11388 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC25.14■■□□□ 1.61
TOP2AP11388 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
TOP2AP11388 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
TOP2AP11388 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC25.14■■□□□ 1.61
TOP2AP11388 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC25.14■■□□□ 1.61
TOP2AP11388 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC25.14■■□□□ 1.61
TOP2AP11388 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
TOP2AP11388 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
TOP2AP11388 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
TOP2AP11388 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
TOP2AP11388 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC25.13■■□□□ 1.61
TOP2AP11388 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC25.13■■□□□ 1.61
TOP2AP11388 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
TOP2AP11388 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
TOP2AP11388 GEMIN8P4-201ENST00000380526 729 ntBASIC25.13■■□□□ 1.61
TOP2AP11388 RN7SL582P-201ENST00000491078 279 ntBASIC25.13■■□□□ 1.61
TOP2AP11388 AC022447.6-201ENST00000515522 438 ntBASIC25.13■■□□□ 1.61
TOP2AP11388 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC25.13■■□□□ 1.61
TOP2AP11388 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC25.13■■□□□ 1.61
TOP2AP11388 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
TOP2AP11388 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC25.13■■□□□ 1.61
TOP2AP11388 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
TOP2AP11388 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
TOP2AP11388 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
TOP2AP11388 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
TOP2AP11388 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
TOP2AP11388 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
TOP2AP11388 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
TOP2AP11388 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
TOP2AP11388 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC25.13■■□□□ 1.61
TOP2AP11388 AC008894.3-201ENST00000624324 3103 ntBASIC25.13■■□□□ 1.61
TOP2AP11388 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
TOP2AP11388 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
TOP2AP11388 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
TOP2AP11388 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
TOP2AP11388 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
TOP2AP11388 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
TOP2AP11388 PTGER4P2-201ENST00000328411 252 ntBASIC25.12■■□□□ 1.61
TOP2AP11388 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC25.12■■□□□ 1.61
TOP2AP11388 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC25.12■■□□□ 1.61
TOP2AP11388 SERF2-206ENST00000409291 807 ntTSL 3 BASIC25.12■■□□□ 1.61
TOP2AP11388 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC25.12■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms