Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC17.8■□□□□ 0.44
POLR3DP05423 AC023090.2-201ENST00000625182 2110 ntBASIC17.8■□□□□ 0.44
POLR3DP05423 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
POLR3DP05423 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC17.8■□□□□ 0.44
POLR3DP05423 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
POLR3DP05423 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
POLR3DP05423 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
POLR3DP05423 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
POLR3DP05423 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
POLR3DP05423 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
POLR3DP05423 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
POLR3DP05423 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
POLR3DP05423 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
POLR3DP05423 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
POLR3DP05423 ACE3P-201ENST00000423435 1973 ntBASIC17.79■□□□□ 0.44
POLR3DP05423 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
POLR3DP05423 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
POLR3DP05423 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
POLR3DP05423 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC17.79■□□□□ 0.44
POLR3DP05423 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
POLR3DP05423 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC17.79■□□□□ 0.44
POLR3DP05423 RN7SKP230-201ENST00000365642 335 ntBASIC17.79■□□□□ 0.44
POLR3DP05423 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
POLR3DP05423 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC17.79■□□□□ 0.44
POLR3DP05423 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC17.79■□□□□ 0.44
POLR3DP05423 ATP6V0CP2-201ENST00000469409 207 ntBASIC17.79■□□□□ 0.44
POLR3DP05423 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC17.79■□□□□ 0.44
POLR3DP05423 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC17.79■□□□□ 0.44
POLR3DP05423 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC17.79■□□□□ 0.44
POLR3DP05423 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
POLR3DP05423 KLK11-210ENST00000600362 759 ntTSL 3 BASIC17.79■□□□□ 0.44
POLR3DP05423 AL358472.3-201ENST00000608147 415 ntBASIC17.79■□□□□ 0.44
POLR3DP05423 AC007663.3-201ENST00000609632 465 ntBASIC17.79■□□□□ 0.44
POLR3DP05423 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC17.79■□□□□ 0.44
POLR3DP05423 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
POLR3DP05423 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
POLR3DP05423 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
POLR3DP05423 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
POLR3DP05423 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC17.79■□□□□ 0.44
POLR3DP05423 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC17.79■□□□□ 0.44
POLR3DP05423 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC17.79■□□□□ 0.44
POLR3DP05423 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
POLR3DP05423 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
POLR3DP05423 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
POLR3DP05423 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
POLR3DP05423 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
POLR3DP05423 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
POLR3DP05423 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
POLR3DP05423 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC17.79■□□□□ 0.44
POLR3DP05423 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
POLR3DP05423 PCDHGB8P-201ENST00000502926 1973 ntBASIC17.79■□□□□ 0.44
POLR3DP05423 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
POLR3DP05423 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
POLR3DP05423 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC17.78■□□□□ 0.44
POLR3DP05423 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
POLR3DP05423 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
POLR3DP05423 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC17.78■□□□□ 0.44
POLR3DP05423 AL138725.1-201ENST00000407347 1314 ntBASIC17.78■□□□□ 0.44
POLR3DP05423 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
POLR3DP05423 AC126755.1-201ENST00000525846 6405 ntBASIC17.78■□□□□ 0.44
POLR3DP05423 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
POLR3DP05423 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
POLR3DP05423 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
POLR3DP05423 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
POLR3DP05423 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
POLR3DP05423 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
POLR3DP05423 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC17.78■□□□□ 0.44
POLR3DP05423 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
POLR3DP05423 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
POLR3DP05423 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
POLR3DP05423 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
POLR3DP05423 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
POLR3DP05423 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
POLR3DP05423 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
POLR3DP05423 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
POLR3DP05423 HNRNPA1P32-201ENST00000396326 963 ntBASIC17.78■□□□□ 0.44
POLR3DP05423 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC17.78■□□□□ 0.44
POLR3DP05423 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC17.78■□□□□ 0.44
POLR3DP05423 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC17.78■□□□□ 0.44
POLR3DP05423 CDC23-208ENST00000505120 455 ntTSL 3 BASIC17.78■□□□□ 0.44
POLR3DP05423 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC17.78■□□□□ 0.44
POLR3DP05423 DIO1-215ENST00000610607 796 ntTSL 5 BASIC17.78■□□□□ 0.44
POLR3DP05423 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
POLR3DP05423 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
POLR3DP05423 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
POLR3DP05423 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
POLR3DP05423 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
POLR3DP05423 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
POLR3DP05423 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
POLR3DP05423 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
POLR3DP05423 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
POLR3DP05423 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC17.78■□□□□ 0.44
POLR3DP05423 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
POLR3DP05423 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
POLR3DP05423 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC17.78■□□□□ 0.44
POLR3DP05423 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
POLR3DP05423 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
POLR3DP05423 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
POLR3DP05423 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
POLR3DP05423 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms