Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 AC105339.1-204ENST00000636249 355 ntBASIC13.36□□□□□ -0.27
CDRT1O95170 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDRT1O95170 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDRT1O95170 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDRT1O95170 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC13.36□□□□□ -0.27
CDRT1O95170 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CDRT1O95170 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CDRT1O95170 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
CDRT1O95170 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CDRT1O95170 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDRT1O95170 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CDRT1O95170 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CDRT1O95170 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.36□□□□□ -0.27
CDRT1O95170 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CDRT1O95170 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CDRT1O95170 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDRT1O95170 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDRT1O95170 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.36□□□□□ -0.27
CDRT1O95170 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CDRT1O95170 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC13.36□□□□□ -0.27
CDRT1O95170 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDRT1O95170 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CDRT1O95170 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDRT1O95170 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
CDRT1O95170 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CDRT1O95170 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDRT1O95170 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDRT1O95170 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CDRT1O95170 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CDRT1O95170 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDRT1O95170 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDRT1O95170 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDRT1O95170 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
CDRT1O95170 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDRT1O95170 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDRT1O95170 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.35□□□□□ -0.27
CDRT1O95170 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CDRT1O95170 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC13.35□□□□□ -0.27
CDRT1O95170 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDRT1O95170 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CDRT1O95170 TCAM1P-207ENST00000485295 1537 ntBASIC13.35□□□□□ -0.27
CDRT1O95170 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.35□□□□□ -0.27
CDRT1O95170 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CDRT1O95170 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDRT1O95170 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDRT1O95170 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CDRT1O95170 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDRT1O95170 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.35□□□□□ -0.27
CDRT1O95170 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDRT1O95170 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDRT1O95170 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
CDRT1O95170 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDRT1O95170 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDRT1O95170 MIR574-201ENST00000385209 96 ntBASIC13.35□□□□□ -0.27
CDRT1O95170 FAM58DP-201ENST00000428076 619 ntBASIC13.35□□□□□ -0.27
CDRT1O95170 TARDBPP1-201ENST00000442013 1203 ntBASIC13.35□□□□□ -0.27
CDRT1O95170 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC13.35□□□□□ -0.27
CDRT1O95170 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC13.35□□□□□ -0.27
CDRT1O95170 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC13.35□□□□□ -0.27
CDRT1O95170 TSFM-210ENST00000550559 897 ntTSL 5 BASIC13.35□□□□□ -0.27
CDRT1O95170 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
CDRT1O95170 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC13.35□□□□□ -0.27
CDRT1O95170 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC13.35□□□□□ -0.27
CDRT1O95170 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
CDRT1O95170 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
CDRT1O95170 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDRT1O95170 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC13.35□□□□□ -0.27
CDRT1O95170 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CDRT1O95170 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.35□□□□□ -0.27
CDRT1O95170 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDRT1O95170 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDRT1O95170 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDRT1O95170 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDRT1O95170 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDRT1O95170 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDRT1O95170 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.35□□□□□ -0.27
CDRT1O95170 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDRT1O95170 ELL2P1-201ENST00000413990 1906 ntBASIC13.35□□□□□ -0.27
CDRT1O95170 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
CDRT1O95170 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC13.35□□□□□ -0.27
CDRT1O95170 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDRT1O95170 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CDRT1O95170 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDRT1O95170 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDRT1O95170 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDRT1O95170 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
CDRT1O95170 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC13.34□□□□□ -0.27
CDRT1O95170 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
CDRT1O95170 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC13.34□□□□□ -0.27
CDRT1O95170 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
CDRT1O95170 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC13.34□□□□□ -0.27
CDRT1O95170 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDRT1O95170 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CDRT1O95170 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC13.34□□□□□ -0.27
CDRT1O95170 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDRT1O95170 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CDRT1O95170 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
CDRT1O95170 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC13.34□□□□□ -0.27
CDRT1O95170 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
CDRT1O95170 HIST3H2BA-201ENST00000436555 524 ntBASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms