Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN11O75508 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN11O75508 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN11O75508 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.15■□□□□ 0.02
CLDN11O75508 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.15■□□□□ 0.02
CLDN11O75508 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN11O75508 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN11O75508 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN11O75508 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CLDN11O75508 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN11O75508 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN11O75508 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN11O75508 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN11O75508 GRN-222ENST00000639447 1314 ntTSL 2 BASIC15.15■□□□□ 0.02
CLDN11O75508 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN11O75508 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN11O75508 MTHFR-210ENST00000641407 2387 ntBASIC15.14■□□□□ 0.01
CLDN11O75508 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CLDN11O75508 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN11O75508 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
CLDN11O75508 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.14■□□□□ 0.01
CLDN11O75508 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN11O75508 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
CLDN11O75508 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
CLDN11O75508 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
CLDN11O75508 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN11O75508 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN11O75508 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN11O75508 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC15.14■□□□□ 0.01
CLDN11O75508 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN11O75508 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN11O75508 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC15.14■□□□□ 0.01
CLDN11O75508 AC012441.2-201ENST00000444843 739 ntBASIC15.14■□□□□ 0.01
CLDN11O75508 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN11O75508 AC126915.1-201ENST00000522847 1038 ntBASIC15.14■□□□□ 0.01
CLDN11O75508 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC15.14■□□□□ 0.01
CLDN11O75508 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN11O75508 MIR4525-201ENST00000580000 75 ntBASIC15.14■□□□□ 0.01
CLDN11O75508 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC15.14■□□□□ 0.01
CLDN11O75508 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN11O75508 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
CLDN11O75508 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CLDN11O75508 HARS-202ENST00000415192 1401 ntTSL 2 BASIC15.14■□□□□ 0.01
CLDN11O75508 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN11O75508 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CLDN11O75508 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CLDN11O75508 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN11O75508 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN11O75508 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN11O75508 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN11O75508 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN11O75508 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN11O75508 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
CLDN11O75508 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN11O75508 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.14■□□□□ 0.01
CLDN11O75508 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN11O75508 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.14■□□□□ 0.01
CLDN11O75508 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN11O75508 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN11O75508 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.13■□□□□ 0.01
CLDN11O75508 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN11O75508 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.13■□□□□ 0.01
CLDN11O75508 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CLDN11O75508 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN11O75508 AC244394.1-201ENST00000435000 1665 ntBASIC15.13■□□□□ 0.01
CLDN11O75508 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN11O75508 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN11O75508 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN11O75508 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN11O75508 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN11O75508 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN11O75508 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN11O75508 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC15.13■□□□□ 0.01
CLDN11O75508 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN11O75508 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC15.13■□□□□ 0.01
CLDN11O75508 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC15.13■□□□□ 0.01
CLDN11O75508 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC15.13■□□□□ 0.01
CLDN11O75508 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN11O75508 EMC4-209ENST00000559421 497 ntTSL 2 BASIC15.13■□□□□ 0.01
CLDN11O75508 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN11O75508 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CLDN11O75508 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC15.13■□□□□ 0.01
CLDN11O75508 AC243960.2-201ENST00000600996 747 ntBASIC15.13■□□□□ 0.01
CLDN11O75508 AC009884.2-201ENST00000603110 324 ntBASIC15.13■□□□□ 0.01
CLDN11O75508 MIR6720-201ENST00000611664 98 ntBASIC15.13■□□□□ 0.01
CLDN11O75508 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC15.13■□□□□ 0.01
CLDN11O75508 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CLDN11O75508 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC15.13■□□□□ 0.01
CLDN11O75508 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CLDN11O75508 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CLDN11O75508 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN11O75508 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.13■□□□□ 0.01
CLDN11O75508 AMT-239ENST00000636865 1914 ntTSL 5 BASIC15.13■□□□□ 0.01
CLDN11O75508 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN11O75508 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN11O75508 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
CLDN11O75508 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CLDN11O75508 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN11O75508 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN11O75508 AL354702.1-201ENST00000442006 1960 ntBASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms