Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC12.21□□□□□ -0.45
SSSCA1O60232 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC12.21□□□□□ -0.45
SSSCA1O60232 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC12.21□□□□□ -0.45
SSSCA1O60232 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
SSSCA1O60232 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SSSCA1O60232 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC12.21□□□□□ -0.45
SSSCA1O60232 C8orf49-201ENST00000525043 1968 ntBASIC12.21□□□□□ -0.45
SSSCA1O60232 MIR497HG-202ENST00000572453 3838 ntBASIC12.21□□□□□ -0.45
SSSCA1O60232 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SSSCA1O60232 TNN-202ENST00000621086 4234 ntTSL 5 BASIC12.21□□□□□ -0.45
SSSCA1O60232 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
SSSCA1O60232 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
SSSCA1O60232 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC12.21□□□□□ -0.45
SSSCA1O60232 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SSSCA1O60232 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SSSCA1O60232 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC12.21□□□□□ -0.45
SSSCA1O60232 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
SSSCA1O60232 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
SSSCA1O60232 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
SSSCA1O60232 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SSSCA1O60232 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
SSSCA1O60232 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SSSCA1O60232 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SSSCA1O60232 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC12.21□□□□□ -0.45
SSSCA1O60232 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC12.21□□□□□ -0.45
SSSCA1O60232 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
SSSCA1O60232 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC12.21□□□□□ -0.45
SSSCA1O60232 TMEM198B-204ENST00000484016 896 ntBASIC12.21□□□□□ -0.45
SSSCA1O60232 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC12.21□□□□□ -0.45
SSSCA1O60232 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SSSCA1O60232 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC12.21□□□□□ -0.45
SSSCA1O60232 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SSSCA1O60232 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC12.21□□□□□ -0.45
SSSCA1O60232 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC12.21□□□□□ -0.45
SSSCA1O60232 CITED2-204ENST00000618718 901 ntTSL 2 BASIC12.21□□□□□ -0.45
SSSCA1O60232 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC12.21□□□□□ -0.45
SSSCA1O60232 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC12.21□□□□□ -0.45
SSSCA1O60232 AC084121.4-201ENST00000641598 221 ntBASIC12.21□□□□□ -0.45
SSSCA1O60232 AF228730.8-201ENST00000642140 221 ntBASIC12.21□□□□□ -0.45
SSSCA1O60232 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SSSCA1O60232 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
SSSCA1O60232 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
SSSCA1O60232 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
SSSCA1O60232 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
SSSCA1O60232 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC12.21□□□□□ -0.46
SSSCA1O60232 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
SSSCA1O60232 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC12.21□□□□□ -0.46
SSSCA1O60232 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
SSSCA1O60232 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
SSSCA1O60232 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
SSSCA1O60232 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
SSSCA1O60232 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
SSSCA1O60232 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC12.21□□□□□ -0.46
SSSCA1O60232 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
SSSCA1O60232 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
SSSCA1O60232 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
SSSCA1O60232 TCAM1P-207ENST00000485295 1537 ntBASIC12.21□□□□□ -0.46
SSSCA1O60232 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
SSSCA1O60232 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC12.21□□□□□ -0.46
SSSCA1O60232 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC12.21□□□□□ -0.46
SSSCA1O60232 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SSSCA1O60232 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SSSCA1O60232 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SSSCA1O60232 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SSSCA1O60232 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SSSCA1O60232 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
SSSCA1O60232 CICP16-201ENST00000502609 2813 ntBASIC12.2□□□□□ -0.46
SSSCA1O60232 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SSSCA1O60232 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SSSCA1O60232 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC12.2□□□□□ -0.46
SSSCA1O60232 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SSSCA1O60232 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC12.2□□□□□ -0.46
SSSCA1O60232 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SSSCA1O60232 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
SSSCA1O60232 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SSSCA1O60232 SON-203ENST00000381679 7860 ntTSL 5 BASIC12.2□□□□□ -0.46
SSSCA1O60232 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC12.2□□□□□ -0.46
SSSCA1O60232 FAM90A12P-201ENST00000519497 2375 ntBASIC12.2□□□□□ -0.46
SSSCA1O60232 FAM90A24P-201ENST00000520792 2369 ntBASIC12.2□□□□□ -0.46
SSSCA1O60232 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC12.2□□□□□ -0.46
SSSCA1O60232 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
SSSCA1O60232 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SSSCA1O60232 Z97205.2-201ENST00000564697 1639 ntBASIC12.2□□□□□ -0.46
SSSCA1O60232 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SSSCA1O60232 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
SSSCA1O60232 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SSSCA1O60232 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
SSSCA1O60232 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SSSCA1O60232 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
SSSCA1O60232 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SSSCA1O60232 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SSSCA1O60232 MIR1224-201ENST00000408193 85 ntBASIC12.2□□□□□ -0.46
SSSCA1O60232 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SSSCA1O60232 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC12.2□□□□□ -0.46
SSSCA1O60232 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC12.2□□□□□ -0.46
SSSCA1O60232 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC12.2□□□□□ -0.46
SSSCA1O60232 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC12.2□□□□□ -0.46
SSSCA1O60232 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SSSCA1O60232 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC12.2□□□□□ -0.46
SSSCA1O60232 LITAF-210ENST00000571976 548 ntTSL 2 BASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms