Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SNAI2O43623 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SNAI2O43623 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SNAI2O43623 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC11.24□□□□□ -0.61
SNAI2O43623 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SNAI2O43623 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC11.24□□□□□ -0.61
SNAI2O43623 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
SNAI2O43623 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SNAI2O43623 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SNAI2O43623 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
SNAI2O43623 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SNAI2O43623 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC11.24□□□□□ -0.61
SNAI2O43623 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SNAI2O43623 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SNAI2O43623 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC11.24□□□□□ -0.61
SNAI2O43623 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC11.24□□□□□ -0.61
SNAI2O43623 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SNAI2O43623 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC11.24□□□□□ -0.61
SNAI2O43623 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
SNAI2O43623 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SNAI2O43623 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SNAI2O43623 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SNAI2O43623 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC11.24□□□□□ -0.61
SNAI2O43623 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC11.24□□□□□ -0.61
SNAI2O43623 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
SNAI2O43623 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
SNAI2O43623 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
SNAI2O43623 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC11.24□□□□□ -0.61
SNAI2O43623 AL591424.1-201ENST00000442569 1213 ntBASIC11.24□□□□□ -0.61
SNAI2O43623 RPL13AP23-201ENST00000480739 586 ntBASIC11.24□□□□□ -0.61
SNAI2O43623 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC11.24□□□□□ -0.61
SNAI2O43623 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC11.24□□□□□ -0.61
SNAI2O43623 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SNAI2O43623 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC11.24□□□□□ -0.61
SNAI2O43623 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC11.24□□□□□ -0.61
SNAI2O43623 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC11.24□□□□□ -0.61
SNAI2O43623 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC11.24□□□□□ -0.61
SNAI2O43623 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SNAI2O43623 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SNAI2O43623 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SNAI2O43623 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC11.24□□□□□ -0.61
SNAI2O43623 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SNAI2O43623 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SNAI2O43623 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
SNAI2O43623 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SNAI2O43623 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SNAI2O43623 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC11.24□□□□□ -0.61
SNAI2O43623 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC11.24□□□□□ -0.61
SNAI2O43623 MAPT-IT1-201ENST00000624111 3016 ntBASIC11.24□□□□□ -0.61
SNAI2O43623 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SNAI2O43623 UXT-AS1-201ENST00000590504 1525 ntBASIC11.24□□□□□ -0.61
SNAI2O43623 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SNAI2O43623 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SNAI2O43623 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC11.24□□□□□ -0.61
SNAI2O43623 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
SNAI2O43623 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SNAI2O43623 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SNAI2O43623 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SNAI2O43623 AC055811.4-201ENST00000624039 1754 ntBASIC11.23□□□□□ -0.61
SNAI2O43623 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
SNAI2O43623 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SNAI2O43623 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
SNAI2O43623 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SNAI2O43623 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SNAI2O43623 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
SNAI2O43623 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC11.23□□□□□ -0.61
SNAI2O43623 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
SNAI2O43623 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
SNAI2O43623 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
SNAI2O43623 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SNAI2O43623 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC11.23□□□□□ -0.61
SNAI2O43623 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC11.23□□□□□ -0.61
SNAI2O43623 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC11.23□□□□□ -0.61
SNAI2O43623 PFN2-205ENST00000461868 613 ntTSL 2 BASIC11.23□□□□□ -0.61
SNAI2O43623 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
SNAI2O43623 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC11.23□□□□□ -0.61
SNAI2O43623 RPL18-209ENST00000550645 463 ntTSL 5 BASIC11.23□□□□□ -0.61
SNAI2O43623 RPL18-214ENST00000552588 559 ntTSL 3 BASIC11.23□□□□□ -0.61
SNAI2O43623 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC11.23□□□□□ -0.61
SNAI2O43623 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC11.23□□□□□ -0.61
SNAI2O43623 COX5A-206ENST00000568783 571 ntTSL 3 BASIC11.23□□□□□ -0.61
SNAI2O43623 TBCB-211ENST00000589996 724 ntTSL 3 BASIC11.23□□□□□ -0.61
SNAI2O43623 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC11.23□□□□□ -0.61
SNAI2O43623 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
SNAI2O43623 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC11.23□□□□□ -0.61
SNAI2O43623 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC11.23□□□□□ -0.61
SNAI2O43623 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SNAI2O43623 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SNAI2O43623 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
SNAI2O43623 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SNAI2O43623 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
SNAI2O43623 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SNAI2O43623 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
SNAI2O43623 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SNAI2O43623 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SNAI2O43623 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SNAI2O43623 AC022497.1-201ENST00000624916 3691 ntBASIC11.23□□□□□ -0.61
SNAI2O43623 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC11.23□□□□□ -0.61
SNAI2O43623 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
SNAI2O43623 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC11.23□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms