Protein–RNA interactions for Protein: O14727

APAF1, Apoptotic protease-activating factor 1, humanhuman

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1O14727 AC009542.2-202ENST00000619004 1067 ntBASIC19.53■□□□□ 0.72
APAF1O14727 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC19.53■□□□□ 0.72
APAF1O14727 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
APAF1O14727 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
APAF1O14727 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
APAF1O14727 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
APAF1O14727 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
APAF1O14727 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
APAF1O14727 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC19.53■□□□□ 0.72
APAF1O14727 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
APAF1O14727 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
APAF1O14727 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
APAF1O14727 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
APAF1O14727 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC19.52■□□□□ 0.72
APAF1O14727 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
APAF1O14727 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
APAF1O14727 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
APAF1O14727 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
APAF1O14727 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
APAF1O14727 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC19.52■□□□□ 0.72
APAF1O14727 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
APAF1O14727 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
APAF1O14727 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
APAF1O14727 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC19.52■□□□□ 0.72
APAF1O14727 TISP43-201ENST00000409793 538 ntTSL 4 BASIC19.52■□□□□ 0.72
APAF1O14727 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC19.52■□□□□ 0.72
APAF1O14727 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
APAF1O14727 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC19.52■□□□□ 0.72
APAF1O14727 ACR-203ENST00000529621 708 ntTSL 5 BASIC19.52■□□□□ 0.72
APAF1O14727 RNF41-210ENST00000552244 716 ntTSL 3 BASIC19.52■□□□□ 0.72
APAF1O14727 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC19.52■□□□□ 0.72
APAF1O14727 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
APAF1O14727 AL136301.1-201ENST00000615830 422 ntBASIC19.52■□□□□ 0.72
APAF1O14727 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
APAF1O14727 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
APAF1O14727 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
APAF1O14727 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
APAF1O14727 F10-203ENST00000409306 1450 ntTSL 3 BASIC19.52■□□□□ 0.72
APAF1O14727 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
APAF1O14727 MYADML-201ENST00000474610 2147 ntBASIC19.52■□□□□ 0.72
APAF1O14727 MVK-214ENST00000629016 1591 ntTSL 5 BASIC19.52■□□□□ 0.71
APAF1O14727 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
APAF1O14727 AL513477.1-201ENST00000602865 2407 ntBASIC19.52■□□□□ 0.71
APAF1O14727 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
APAF1O14727 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
APAF1O14727 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
APAF1O14727 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
APAF1O14727 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC19.51■□□□□ 0.71
APAF1O14727 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
APAF1O14727 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC19.51■□□□□ 0.71
APAF1O14727 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC19.51■□□□□ 0.71
APAF1O14727 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
APAF1O14727 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
APAF1O14727 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
APAF1O14727 YBX1P6-201ENST00000442962 1002 ntBASIC19.51■□□□□ 0.71
APAF1O14727 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
APAF1O14727 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC19.51■□□□□ 0.71
APAF1O14727 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC19.51■□□□□ 0.71
APAF1O14727 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC19.51■□□□□ 0.71
APAF1O14727 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC19.51■□□□□ 0.71
APAF1O14727 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
APAF1O14727 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
APAF1O14727 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
APAF1O14727 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
APAF1O14727 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
APAF1O14727 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
APAF1O14727 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC19.51■□□□□ 0.71
APAF1O14727 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
APAF1O14727 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
APAF1O14727 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
APAF1O14727 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
APAF1O14727 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
APAF1O14727 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC19.51■□□□□ 0.71
APAF1O14727 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
APAF1O14727 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
APAF1O14727 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
APAF1O14727 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC19.5■□□□□ 0.71
APAF1O14727 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
APAF1O14727 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
APAF1O14727 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
APAF1O14727 KHSRPP1-201ENST00000427983 1768 ntBASIC19.5■□□□□ 0.71
APAF1O14727 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC19.5■□□□□ 0.71
APAF1O14727 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
APAF1O14727 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
APAF1O14727 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
APAF1O14727 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
APAF1O14727 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
APAF1O14727 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
APAF1O14727 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
APAF1O14727 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
APAF1O14727 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
APAF1O14727 AC010141.1-201ENST00000411585 623 ntBASIC19.5■□□□□ 0.71
APAF1O14727 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC19.5■□□□□ 0.71
APAF1O14727 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC19.5■□□□□ 0.71
APAF1O14727 CICP12-201ENST00000455801 843 ntBASIC19.5■□□□□ 0.71
APAF1O14727 AL583810.1-201ENST00000553344 1045 ntBASIC19.5■□□□□ 0.71
APAF1O14727 CYGB-203ENST00000589145 788 ntTSL 3 BASIC19.5■□□□□ 0.71
APAF1O14727 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
APAF1O14727 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
APAF1O14727 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms