Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 R3HDM2P2-201ENST00000401880 2116 ntBASIC11.98□□□□□ -0.49
UPK2O00526 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC11.98□□□□□ -0.49
UPK2O00526 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC11.98□□□□□ -0.49
UPK2O00526 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
UPK2O00526 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
UPK2O00526 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC11.98□□□□□ -0.49
UPK2O00526 AL359881.3-201ENST00000602640 1721 ntBASIC11.98□□□□□ -0.49
UPK2O00526 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
UPK2O00526 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC11.98□□□□□ -0.49
UPK2O00526 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC11.98□□□□□ -0.49
UPK2O00526 AC003102.2-201ENST00000589195 1469 ntBASIC11.98□□□□□ -0.49
UPK2O00526 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
UPK2O00526 HNRNPA1P48-201ENST00000562726 1377 ntBASIC11.98□□□□□ -0.49
UPK2O00526 AL136172.1-201ENST00000598590 1394 ntBASIC11.98□□□□□ -0.49
UPK2O00526 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
UPK2O00526 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
UPK2O00526 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
UPK2O00526 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC11.98□□□□□ -0.49
UPK2O00526 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
UPK2O00526 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC11.98□□□□□ -0.49
UPK2O00526 SERF2-209ENST00000409646 559 ntTSL 4 BASIC11.98□□□□□ -0.49
UPK2O00526 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC11.98□□□□□ -0.49
UPK2O00526 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC11.98□□□□□ -0.49
UPK2O00526 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
UPK2O00526 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC11.98□□□□□ -0.49
UPK2O00526 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC11.98□□□□□ -0.49
UPK2O00526 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC11.98□□□□□ -0.49
UPK2O00526 NAA60-208ENST00000570819 833 ntTSL 2 BASIC11.98□□□□□ -0.49
UPK2O00526 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
UPK2O00526 TMEM261P1-201ENST00000604899 340 ntBASIC11.98□□□□□ -0.49
UPK2O00526 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
UPK2O00526 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
UPK2O00526 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC11.98□□□□□ -0.49
UPK2O00526 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
UPK2O00526 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
UPK2O00526 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
UPK2O00526 AC126335.2-201ENST00000623362 4637 ntBASIC11.98□□□□□ -0.49
UPK2O00526 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
UPK2O00526 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
UPK2O00526 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
UPK2O00526 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
UPK2O00526 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
UPK2O00526 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
UPK2O00526 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
UPK2O00526 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
UPK2O00526 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
UPK2O00526 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
UPK2O00526 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UPK2O00526 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UPK2O00526 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
UPK2O00526 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UPK2O00526 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
UPK2O00526 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UPK2O00526 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC11.97□□□□□ -0.49
UPK2O00526 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
UPK2O00526 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
UPK2O00526 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
UPK2O00526 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
UPK2O00526 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
UPK2O00526 AL391825.1-201ENST00000457671 1364 ntBASIC11.97□□□□□ -0.49
UPK2O00526 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
UPK2O00526 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC11.97□□□□□ -0.49
UPK2O00526 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC11.97□□□□□ -0.49
UPK2O00526 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC11.97□□□□□ -0.49
UPK2O00526 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
UPK2O00526 ACKR1-201ENST00000368121 1240 ntBASIC11.97□□□□□ -0.49
UPK2O00526 ACTBP8-201ENST00000403258 1108 ntBASIC11.97□□□□□ -0.49
UPK2O00526 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC11.97□□□□□ -0.49
UPK2O00526 INGX-202ENST00000489074 768 ntBASIC11.97□□□□□ -0.49
UPK2O00526 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC11.97□□□□□ -0.49
UPK2O00526 HNRNPA1P13-201ENST00000510646 963 ntBASIC11.97□□□□□ -0.49
UPK2O00526 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC11.97□□□□□ -0.49
UPK2O00526 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
UPK2O00526 ENPP7P5-201ENST00000541031 1031 ntBASIC11.97□□□□□ -0.49
UPK2O00526 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC11.97□□□□□ -0.49
UPK2O00526 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC11.97□□□□□ -0.49
UPK2O00526 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC11.97□□□□□ -0.49
UPK2O00526 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC11.97□□□□□ -0.49
UPK2O00526 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
UPK2O00526 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC11.97□□□□□ -0.49
UPK2O00526 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UPK2O00526 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
UPK2O00526 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UPK2O00526 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
UPK2O00526 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
UPK2O00526 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
UPK2O00526 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UPK2O00526 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
UPK2O00526 AC090505.1-201ENST00000430515 1834 ntBASIC11.97□□□□□ -0.49
UPK2O00526 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
UPK2O00526 AC005840.4-201ENST00000541242 2494 ntBASIC11.97□□□□□ -0.49
UPK2O00526 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
UPK2O00526 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UPK2O00526 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
UPK2O00526 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC11.97□□□□□ -0.49
UPK2O00526 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
UPK2O00526 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC11.96□□□□□ -0.49
UPK2O00526 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
UPK2O00526 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
UPK2O00526 MYADML-201ENST00000474610 2147 ntBASIC11.96□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms