Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CCDC162PA2VCL2 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC162PA2VCL2 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC162PA2VCL2 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC162PA2VCL2 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC162PA2VCL2 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC162PA2VCL2 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC162PA2VCL2 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CCDC162PA2VCL2 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC162PA2VCL2 CU639417.3-201ENST00000624240 1404 ntBASIC14.93□□□□□ -0.02
CCDC162PA2VCL2 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CCDC162PA2VCL2 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CCDC162PA2VCL2 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.93□□□□□ -0.02
CCDC162PA2VCL2 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CCDC162PA2VCL2 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC162PA2VCL2 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.93□□□□□ -0.02
CCDC162PA2VCL2 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.93□□□□□ -0.02
CCDC162PA2VCL2 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC162PA2VCL2 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC162PA2VCL2 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.93□□□□□ -0.02
CCDC162PA2VCL2 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC162PA2VCL2 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.93□□□□□ -0.02
CCDC162PA2VCL2 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.93□□□□□ -0.02
CCDC162PA2VCL2 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC162PA2VCL2 RN7SKP230-201ENST00000365642 335 ntBASIC14.93□□□□□ -0.02
CCDC162PA2VCL2 AC005229.1-201ENST00000392885 409 ntBASIC14.93□□□□□ -0.02
CCDC162PA2VCL2 AC092933.1-201ENST00000393644 945 ntBASIC14.93□□□□□ -0.02
CCDC162PA2VCL2 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC162PA2VCL2 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.93□□□□□ -0.02
CCDC162PA2VCL2 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.93□□□□□ -0.02
CCDC162PA2VCL2 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.93□□□□□ -0.02
CCDC162PA2VCL2 COX5BP8-201ENST00000416911 349 ntBASIC14.93□□□□□ -0.02
CCDC162PA2VCL2 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.93□□□□□ -0.02
CCDC162PA2VCL2 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.93□□□□□ -0.02
CCDC162PA2VCL2 MESTP3-201ENST00000503460 968 ntBASIC14.93□□□□□ -0.02
CCDC162PA2VCL2 AC025279.2-201ENST00000569730 653 ntBASIC14.93□□□□□ -0.02
CCDC162PA2VCL2 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.93□□□□□ -0.02
CCDC162PA2VCL2 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.93□□□□□ -0.02
CCDC162PA2VCL2 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC14.93□□□□□ -0.02
CCDC162PA2VCL2 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.93□□□□□ -0.02
CCDC162PA2VCL2 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.93□□□□□ -0.02
CCDC162PA2VCL2 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC162PA2VCL2 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC162PA2VCL2 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.93□□□□□ -0.02
CCDC162PA2VCL2 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.93□□□□□ -0.02
CCDC162PA2VCL2 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC162PA2VCL2 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.93□□□□□ -0.02
CCDC162PA2VCL2 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.93□□□□□ -0.02
CCDC162PA2VCL2 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CCDC162PA2VCL2 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC162PA2VCL2 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC162PA2VCL2 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.93□□□□□ -0.02
CCDC162PA2VCL2 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CCDC162PA2VCL2 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.93□□□□□ -0.02
CCDC162PA2VCL2 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
CCDC162PA2VCL2 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.93□□□□□ -0.02
CCDC162PA2VCL2 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.93□□□□□ -0.02
CCDC162PA2VCL2 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC162PA2VCL2 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC162PA2VCL2 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC162PA2VCL2 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14.92□□□□□ -0.02
CCDC162PA2VCL2 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.92□□□□□ -0.02
CCDC162PA2VCL2 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.92□□□□□ -0.02
CCDC162PA2VCL2 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC162PA2VCL2 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.92□□□□□ -0.02
CCDC162PA2VCL2 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
CCDC162PA2VCL2 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC162PA2VCL2 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC162PA2VCL2 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC162PA2VCL2 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CCDC162PA2VCL2 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC162PA2VCL2 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC162PA2VCL2 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC162PA2VCL2 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC162PA2VCL2 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CCDC162PA2VCL2 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC162PA2VCL2 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC14.92□□□□□ -0.02
CCDC162PA2VCL2 AL035633.1-201ENST00000406139 838 ntBASIC14.92□□□□□ -0.02
CCDC162PA2VCL2 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.92□□□□□ -0.02
CCDC162PA2VCL2 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.92□□□□□ -0.02
CCDC162PA2VCL2 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC162PA2VCL2 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC14.92□□□□□ -0.02
CCDC162PA2VCL2 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CCDC162PA2VCL2 CECR7-204ENST00000609932 568 ntTSL 2 BASIC14.92□□□□□ -0.02
CCDC162PA2VCL2 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC162PA2VCL2 AC138466.3-201ENST00000619983 221 ntBASIC14.92□□□□□ -0.02
CCDC162PA2VCL2 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.92□□□□□ -0.02
CCDC162PA2VCL2 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.92□□□□□ -0.02
CCDC162PA2VCL2 INE2-201ENST00000630399 1874 ntBASIC14.92□□□□□ -0.02
CCDC162PA2VCL2 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CCDC162PA2VCL2 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CCDC162PA2VCL2 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.92□□□□□ -0.02
CCDC162PA2VCL2 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC162PA2VCL2 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC162PA2VCL2 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC162PA2VCL2 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC162PA2VCL2 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CCDC162PA2VCL2 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CCDC162PA2VCL2 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.92□□□□□ -0.02
CCDC162PA2VCL2 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms