Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LOC102724428A0A0B4J2F2 BRD7P5-201ENST00000299197 1822 ntBASIC18.58■□□□□ 0.56
LOC102724428A0A0B4J2F2 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LOC102724428A0A0B4J2F2 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
LOC102724428A0A0B4J2F2 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
LOC102724428A0A0B4J2F2 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LOC102724428A0A0B4J2F2 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LOC102724428A0A0B4J2F2 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
LOC102724428A0A0B4J2F2 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LOC102724428A0A0B4J2F2 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC18.57■□□□□ 0.56
LOC102724428A0A0B4J2F2 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.57■□□□□ 0.56
LOC102724428A0A0B4J2F2 HYMAI-201ENST00000635591 3347 ntBASIC18.57■□□□□ 0.56
LOC102724428A0A0B4J2F2 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
LOC102724428A0A0B4J2F2 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LOC102724428A0A0B4J2F2 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LOC102724428A0A0B4J2F2 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LOC102724428A0A0B4J2F2 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LOC102724428A0A0B4J2F2 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LOC102724428A0A0B4J2F2 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
LOC102724428A0A0B4J2F2 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC18.57■□□□□ 0.56
LOC102724428A0A0B4J2F2 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LOC102724428A0A0B4J2F2 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC18.57■□□□□ 0.56
LOC102724428A0A0B4J2F2 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC18.57■□□□□ 0.56
LOC102724428A0A0B4J2F2 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC18.57■□□□□ 0.56
LOC102724428A0A0B4J2F2 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LOC102724428A0A0B4J2F2 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC18.57■□□□□ 0.56
LOC102724428A0A0B4J2F2 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC18.57■□□□□ 0.56
LOC102724428A0A0B4J2F2 ELP5-212ENST00000574255 671 ntTSL 2 BASIC18.57■□□□□ 0.56
LOC102724428A0A0B4J2F2 RN7SL665P-201ENST00000578793 300 ntBASIC18.57■□□□□ 0.56
LOC102724428A0A0B4J2F2 HKR1-225ENST00000592168 566 ntTSL 4 BASIC18.57■□□□□ 0.56
LOC102724428A0A0B4J2F2 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC18.57■□□□□ 0.56
LOC102724428A0A0B4J2F2 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LOC102724428A0A0B4J2F2 AL591471.1-201ENST00000621855 229 ntBASIC18.57■□□□□ 0.56
LOC102724428A0A0B4J2F2 AC011471.3-201ENST00000623576 402 ntBASIC18.57■□□□□ 0.56
LOC102724428A0A0B4J2F2 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
LOC102724428A0A0B4J2F2 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
LOC102724428A0A0B4J2F2 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LOC102724428A0A0B4J2F2 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LOC102724428A0A0B4J2F2 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC18.57■□□□□ 0.56
LOC102724428A0A0B4J2F2 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LOC102724428A0A0B4J2F2 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC18.56■□□□□ 0.56
LOC102724428A0A0B4J2F2 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LOC102724428A0A0B4J2F2 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LOC102724428A0A0B4J2F2 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LOC102724428A0A0B4J2F2 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LOC102724428A0A0B4J2F2 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
LOC102724428A0A0B4J2F2 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LOC102724428A0A0B4J2F2 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LOC102724428A0A0B4J2F2 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LOC102724428A0A0B4J2F2 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LOC102724428A0A0B4J2F2 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LOC102724428A0A0B4J2F2 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LOC102724428A0A0B4J2F2 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
LOC102724428A0A0B4J2F2 TEKT4P2-202ENST00000559466 1312 ntBASIC18.56■□□□□ 0.56
LOC102724428A0A0B4J2F2 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
LOC102724428A0A0B4J2F2 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LOC102724428A0A0B4J2F2 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LOC102724428A0A0B4J2F2 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC18.56■□□□□ 0.56
LOC102724428A0A0B4J2F2 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LOC102724428A0A0B4J2F2 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LOC102724428A0A0B4J2F2 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LOC102724428A0A0B4J2F2 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
LOC102724428A0A0B4J2F2 SERF2-206ENST00000409291 807 ntTSL 3 BASIC18.56■□□□□ 0.56
LOC102724428A0A0B4J2F2 HCG27-204ENST00000424675 895 ntTSL 3 BASIC18.56■□□□□ 0.56
LOC102724428A0A0B4J2F2 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC18.56■□□□□ 0.56
LOC102724428A0A0B4J2F2 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LOC102724428A0A0B4J2F2 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC18.56■□□□□ 0.56
LOC102724428A0A0B4J2F2 SIGLEC22P-201ENST00000599104 714 ntBASIC18.56■□□□□ 0.56
LOC102724428A0A0B4J2F2 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
LOC102724428A0A0B4J2F2 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC18.56■□□□□ 0.56
LOC102724428A0A0B4J2F2 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LOC102724428A0A0B4J2F2 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
LOC102724428A0A0B4J2F2 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
LOC102724428A0A0B4J2F2 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.56■□□□□ 0.56
LOC102724428A0A0B4J2F2 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
LOC102724428A0A0B4J2F2 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC18.56■□□□□ 0.56
LOC102724428A0A0B4J2F2 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
LOC102724428A0A0B4J2F2 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LOC102724428A0A0B4J2F2 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC18.56■□□□□ 0.56
LOC102724428A0A0B4J2F2 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LOC102724428A0A0B4J2F2 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LOC102724428A0A0B4J2F2 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LOC102724428A0A0B4J2F2 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LOC102724428A0A0B4J2F2 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LOC102724428A0A0B4J2F2 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
LOC102724428A0A0B4J2F2 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
LOC102724428A0A0B4J2F2 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LOC102724428A0A0B4J2F2 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LOC102724428A0A0B4J2F2 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LOC102724428A0A0B4J2F2 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LOC102724428A0A0B4J2F2 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LOC102724428A0A0B4J2F2 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC18.55■□□□□ 0.56
LOC102724428A0A0B4J2F2 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
LOC102724428A0A0B4J2F2 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LOC102724428A0A0B4J2F2 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC18.55■□□□□ 0.56
LOC102724428A0A0B4J2F2 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LOC102724428A0A0B4J2F2 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LOC102724428A0A0B4J2F2 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LOC102724428A0A0B4J2F2 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LOC102724428A0A0B4J2F2 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms