Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.12□□□□□ -0.31
RHBDD3Q9Y3P4 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.12□□□□□ -0.31
RHBDD3Q9Y3P4 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RHBDD3Q9Y3P4 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RHBDD3Q9Y3P4 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RHBDD3Q9Y3P4 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RHBDD3Q9Y3P4 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
RHBDD3Q9Y3P4 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
RHBDD3Q9Y3P4 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
RHBDD3Q9Y3P4 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.12□□□□□ -0.31
RHBDD3Q9Y3P4 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RHBDD3Q9Y3P4 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
RHBDD3Q9Y3P4 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.12□□□□□ -0.31
RHBDD3Q9Y3P4 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RHBDD3Q9Y3P4 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
RHBDD3Q9Y3P4 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC13.12□□□□□ -0.31
RHBDD3Q9Y3P4 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC13.12□□□□□ -0.31
RHBDD3Q9Y3P4 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RHBDD3Q9Y3P4 METTL26-204ENST00000397665 558 ntTSL 2 BASIC13.12□□□□□ -0.31
RHBDD3Q9Y3P4 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC13.12□□□□□ -0.31
RHBDD3Q9Y3P4 AL353779.1-201ENST00000434793 351 ntBASIC13.12□□□□□ -0.31
RHBDD3Q9Y3P4 TSPY16P-201ENST00000449843 468 ntBASIC13.12□□□□□ -0.31
RHBDD3Q9Y3P4 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
RHBDD3Q9Y3P4 TPT1P11-201ENST00000458482 498 ntBASIC13.12□□□□□ -0.31
RHBDD3Q9Y3P4 RPL13AP25-201ENST00000484130 612 ntBASIC13.12□□□□□ -0.31
RHBDD3Q9Y3P4 AC104596.2-201ENST00000512793 793 ntBASIC13.12□□□□□ -0.31
RHBDD3Q9Y3P4 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.12□□□□□ -0.31
RHBDD3Q9Y3P4 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.12□□□□□ -0.31
RHBDD3Q9Y3P4 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
RHBDD3Q9Y3P4 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RHBDD3Q9Y3P4 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.12□□□□□ -0.31
RHBDD3Q9Y3P4 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.12□□□□□ -0.31
RHBDD3Q9Y3P4 AJ011932.1-201ENST00000621707 465 ntBASIC13.12□□□□□ -0.31
RHBDD3Q9Y3P4 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.12□□□□□ -0.31
RHBDD3Q9Y3P4 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RHBDD3Q9Y3P4 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RHBDD3Q9Y3P4 AL158070.2-201ENST00000623713 1621 ntBASIC13.12□□□□□ -0.31
RHBDD3Q9Y3P4 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RHBDD3Q9Y3P4 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.12□□□□□ -0.31
RHBDD3Q9Y3P4 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
RHBDD3Q9Y3P4 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RHBDD3Q9Y3P4 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RHBDD3Q9Y3P4 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RHBDD3Q9Y3P4 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RHBDD3Q9Y3P4 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.12□□□□□ -0.31
RHBDD3Q9Y3P4 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.12□□□□□ -0.31
RHBDD3Q9Y3P4 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
RHBDD3Q9Y3P4 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
RHBDD3Q9Y3P4 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC13.12□□□□□ -0.31
RHBDD3Q9Y3P4 AC093525.8-201ENST00000624099 1342 ntBASIC13.12□□□□□ -0.31
RHBDD3Q9Y3P4 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RHBDD3Q9Y3P4 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.12□□□□□ -0.31
RHBDD3Q9Y3P4 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
RHBDD3Q9Y3P4 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RHBDD3Q9Y3P4 BEND3P1-201ENST00000421591 1944 ntBASIC13.11□□□□□ -0.31
RHBDD3Q9Y3P4 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.11□□□□□ -0.31
RHBDD3Q9Y3P4 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RHBDD3Q9Y3P4 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
RHBDD3Q9Y3P4 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RHBDD3Q9Y3P4 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.11□□□□□ -0.31
RHBDD3Q9Y3P4 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
RHBDD3Q9Y3P4 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RHBDD3Q9Y3P4 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
RHBDD3Q9Y3P4 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RHBDD3Q9Y3P4 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RHBDD3Q9Y3P4 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RHBDD3Q9Y3P4 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RHBDD3Q9Y3P4 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
RHBDD3Q9Y3P4 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RHBDD3Q9Y3P4 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
RHBDD3Q9Y3P4 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.11□□□□□ -0.31
RHBDD3Q9Y3P4 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RHBDD3Q9Y3P4 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RHBDD3Q9Y3P4 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RHBDD3Q9Y3P4 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RHBDD3Q9Y3P4 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.11□□□□□ -0.31
RHBDD3Q9Y3P4 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC13.11□□□□□ -0.31
RHBDD3Q9Y3P4 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.11□□□□□ -0.31
RHBDD3Q9Y3P4 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC13.11□□□□□ -0.31
RHBDD3Q9Y3P4 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.11□□□□□ -0.31
RHBDD3Q9Y3P4 BRI3BPP1-201ENST00000594224 787 ntBASIC13.11□□□□□ -0.31
RHBDD3Q9Y3P4 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.11□□□□□ -0.31
RHBDD3Q9Y3P4 AC093813.1-201ENST00000605066 256 ntBASIC13.11□□□□□ -0.31
RHBDD3Q9Y3P4 AC099568.2-201ENST00000609194 695 ntBASIC13.11□□□□□ -0.31
RHBDD3Q9Y3P4 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC13.11□□□□□ -0.31
RHBDD3Q9Y3P4 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.11□□□□□ -0.31
RHBDD3Q9Y3P4 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC13.11□□□□□ -0.31
RHBDD3Q9Y3P4 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RHBDD3Q9Y3P4 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.11□□□□□ -0.31
RHBDD3Q9Y3P4 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RHBDD3Q9Y3P4 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
RHBDD3Q9Y3P4 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RHBDD3Q9Y3P4 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RHBDD3Q9Y3P4 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.11□□□□□ -0.31
RHBDD3Q9Y3P4 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RHBDD3Q9Y3P4 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
RHBDD3Q9Y3P4 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
RHBDD3Q9Y3P4 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RHBDD3Q9Y3P4 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RHBDD3Q9Y3P4 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms