Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLF1Q9BQI6 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLF1Q9BQI6 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SLF1Q9BQI6 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC17.31■□□□□ 0.36
SLF1Q9BQI6 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLF1Q9BQI6 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLF1Q9BQI6 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC17.3■□□□□ 0.36
SLF1Q9BQI6 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLF1Q9BQI6 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLF1Q9BQI6 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLF1Q9BQI6 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC17.3■□□□□ 0.36
SLF1Q9BQI6 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC17.3■□□□□ 0.36
SLF1Q9BQI6 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLF1Q9BQI6 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLF1Q9BQI6 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SLF1Q9BQI6 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SLF1Q9BQI6 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLF1Q9BQI6 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLF1Q9BQI6 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLF1Q9BQI6 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLF1Q9BQI6 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC17.3■□□□□ 0.36
SLF1Q9BQI6 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC17.3■□□□□ 0.36
SLF1Q9BQI6 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC17.3■□□□□ 0.36
SLF1Q9BQI6 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC17.3■□□□□ 0.36
SLF1Q9BQI6 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC17.3■□□□□ 0.36
SLF1Q9BQI6 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC17.3■□□□□ 0.36
SLF1Q9BQI6 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLF1Q9BQI6 AC100827.2-201ENST00000563214 1194 ntBASIC17.3■□□□□ 0.36
SLF1Q9BQI6 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
SLF1Q9BQI6 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLF1Q9BQI6 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
SLF1Q9BQI6 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC17.3■□□□□ 0.36
SLF1Q9BQI6 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLF1Q9BQI6 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC17.3■□□□□ 0.36
SLF1Q9BQI6 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLF1Q9BQI6 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SLF1Q9BQI6 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC17.3■□□□□ 0.36
SLF1Q9BQI6 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SLF1Q9BQI6 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLF1Q9BQI6 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLF1Q9BQI6 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLF1Q9BQI6 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC17.3■□□□□ 0.36
SLF1Q9BQI6 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLF1Q9BQI6 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC17.3■□□□□ 0.36
SLF1Q9BQI6 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLF1Q9BQI6 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLF1Q9BQI6 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
SLF1Q9BQI6 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLF1Q9BQI6 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
SLF1Q9BQI6 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLF1Q9BQI6 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SLF1Q9BQI6 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLF1Q9BQI6 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLF1Q9BQI6 REXO1L2P-201ENST00000425429 2069 ntBASIC17.29■□□□□ 0.36
SLF1Q9BQI6 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLF1Q9BQI6 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC17.29■□□□□ 0.36
SLF1Q9BQI6 SDCCAG3P2-201ENST00000326105 1023 ntBASIC17.29■□□□□ 0.36
SLF1Q9BQI6 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLF1Q9BQI6 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLF1Q9BQI6 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLF1Q9BQI6 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
SLF1Q9BQI6 AL662890.1-201ENST00000396818 632 ntBASIC17.29■□□□□ 0.36
SLF1Q9BQI6 KRTAP19-9P-201ENST00000421795 191 ntBASIC17.29■□□□□ 0.36
SLF1Q9BQI6 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC17.29■□□□□ 0.36
SLF1Q9BQI6 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC17.29■□□□□ 0.36
SLF1Q9BQI6 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC17.29■□□□□ 0.36
SLF1Q9BQI6 AC106794.1-201ENST00000506935 792 ntBASIC17.29■□□□□ 0.36
SLF1Q9BQI6 HNRNPA1P36-201ENST00000521313 955 ntBASIC17.29■□□□□ 0.36
SLF1Q9BQI6 RHOQP1-201ENST00000555758 579 ntBASIC17.29■□□□□ 0.36
SLF1Q9BQI6 EID1-202ENST00000560490 584 ntTSL 3 BASIC17.29■□□□□ 0.36
SLF1Q9BQI6 DUX4L46-201ENST00000566845 751 ntBASIC17.29■□□□□ 0.36
SLF1Q9BQI6 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC17.29■□□□□ 0.36
SLF1Q9BQI6 ARL16-210ENST00000574938 751 ntTSL 2 BASIC17.29■□□□□ 0.36
SLF1Q9BQI6 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC17.29■□□□□ 0.36
SLF1Q9BQI6 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLF1Q9BQI6 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC17.29■□□□□ 0.36
SLF1Q9BQI6 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
SLF1Q9BQI6 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLF1Q9BQI6 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SLF1Q9BQI6 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLF1Q9BQI6 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLF1Q9BQI6 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLF1Q9BQI6 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC17.29■□□□□ 0.36
SLF1Q9BQI6 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC17.29■□□□□ 0.36
SLF1Q9BQI6 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLF1Q9BQI6 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLF1Q9BQI6 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC17.29■□□□□ 0.36
SLF1Q9BQI6 E2F3P2-201ENST00000447755 1422 ntBASIC17.29■□□□□ 0.36
SLF1Q9BQI6 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLF1Q9BQI6 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SLF1Q9BQI6 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLF1Q9BQI6 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
SLF1Q9BQI6 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLF1Q9BQI6 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLF1Q9BQI6 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC17.28■□□□□ 0.36
SLF1Q9BQI6 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC17.28■□□□□ 0.36
SLF1Q9BQI6 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLF1Q9BQI6 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLF1Q9BQI6 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLF1Q9BQI6 AC023908.3-201ENST00000564211 3047 ntBASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms