Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 HERC2P11-201ENST00000562845 725 ntBASIC12.37□□□□□ -0.43
CSMD1Q96PZ7 AC100756.2-201ENST00000569537 736 ntBASIC12.37□□□□□ -0.43
CSMD1Q96PZ7 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC12.37□□□□□ -0.43
CSMD1Q96PZ7 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC12.37□□□□□ -0.43
CSMD1Q96PZ7 AC021321.1-201ENST00000607397 1113 ntBASIC12.37□□□□□ -0.43
CSMD1Q96PZ7 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC12.37□□□□□ -0.43
CSMD1Q96PZ7 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CSMD1Q96PZ7 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CSMD1Q96PZ7 ILF3-AS1-201ENST00000591501 1983 ntBASIC12.37□□□□□ -0.43
CSMD1Q96PZ7 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC12.37□□□□□ -0.43
CSMD1Q96PZ7 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
CSMD1Q96PZ7 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC12.37□□□□□ -0.43
CSMD1Q96PZ7 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC12.37□□□□□ -0.43
CSMD1Q96PZ7 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CSMD1Q96PZ7 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CSMD1Q96PZ7 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC12.37□□□□□ -0.43
CSMD1Q96PZ7 IGHV3-43-201ENST00000434710 434 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
CSMD1Q96PZ7 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC12.37□□□□□ -0.43
CSMD1Q96PZ7 OR2A1-AS1-210ENST00000496968 531 ntBASIC12.37□□□□□ -0.43
CSMD1Q96PZ7 AC114947.1-202ENST00000514136 344 ntBASIC12.37□□□□□ -0.43
CSMD1Q96PZ7 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
CSMD1Q96PZ7 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC12.37□□□□□ -0.43
CSMD1Q96PZ7 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC12.37□□□□□ -0.43
CSMD1Q96PZ7 PRMT1P1-201ENST00000604252 1009 ntBASIC12.37□□□□□ -0.43
CSMD1Q96PZ7 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC12.37□□□□□ -0.43
CSMD1Q96PZ7 AC133540.1-201ENST00000620845 1019 ntBASIC12.37□□□□□ -0.43
CSMD1Q96PZ7 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
CSMD1Q96PZ7 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CSMD1Q96PZ7 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CSMD1Q96PZ7 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CSMD1Q96PZ7 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC12.37□□□□□ -0.43
CSMD1Q96PZ7 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CSMD1Q96PZ7 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CSMD1Q96PZ7 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC12.36□□□□□ -0.43
CSMD1Q96PZ7 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CSMD1Q96PZ7 RN7SL300P-201ENST00000582522 318 ntBASIC12.36□□□□□ -0.43
CSMD1Q96PZ7 AC008825.2-201ENST00000603374 718 ntBASIC12.36□□□□□ -0.43
CSMD1Q96PZ7 SRP19-208ENST00000621420 1270 ntTSL 3 BASIC12.36□□□□□ -0.43
CSMD1Q96PZ7 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CSMD1Q96PZ7 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CSMD1Q96PZ7 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CSMD1Q96PZ7 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
CSMD1Q96PZ7 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
CSMD1Q96PZ7 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CSMD1Q96PZ7 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CSMD1Q96PZ7 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
CSMD1Q96PZ7 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CSMD1Q96PZ7 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC12.36□□□□□ -0.43
CSMD1Q96PZ7 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC12.36□□□□□ -0.43
CSMD1Q96PZ7 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CSMD1Q96PZ7 MBP-201ENST00000354542 575 ntTSL 2 BASIC12.36□□□□□ -0.43
CSMD1Q96PZ7 PGAM1P11-201ENST00000416729 680 ntBASIC12.36□□□□□ -0.43
CSMD1Q96PZ7 STAU2-212ENST00000521419 972 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CSMD1Q96PZ7 PHF23-213ENST00000613632 850 ntTSL 5 BASIC12.36□□□□□ -0.43
CSMD1Q96PZ7 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC12.36□□□□□ -0.43
CSMD1Q96PZ7 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CSMD1Q96PZ7 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC12.36□□□□□ -0.43
CSMD1Q96PZ7 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CSMD1Q96PZ7 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC12.36□□□□□ -0.43
CSMD1Q96PZ7 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CSMD1Q96PZ7 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
CSMD1Q96PZ7 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CSMD1Q96PZ7 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
CSMD1Q96PZ7 AL451000.1-201ENST00000451300 1186 ntBASIC12.36□□□□□ -0.43
CSMD1Q96PZ7 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC12.36□□□□□ -0.43
CSMD1Q96PZ7 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC12.36□□□□□ -0.43
CSMD1Q96PZ7 IGHV1-12-201ENST00000518307 205 ntBASIC12.36□□□□□ -0.43
CSMD1Q96PZ7 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC12.36□□□□□ -0.43
CSMD1Q96PZ7 KRT18P37-201ENST00000520711 1282 ntBASIC12.36□□□□□ -0.43
CSMD1Q96PZ7 AC138701.2-201ENST00000553634 226 ntBASIC12.36□□□□□ -0.43
CSMD1Q96PZ7 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CSMD1Q96PZ7 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CSMD1Q96PZ7 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC12.36□□□□□ -0.43
CSMD1Q96PZ7 AL450487.2-201ENST00000615934 407 ntBASIC12.36□□□□□ -0.43
CSMD1Q96PZ7 AC005865.2-202ENST00000635814 725 ntBASIC12.36□□□□□ -0.43
CSMD1Q96PZ7 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
CSMD1Q96PZ7 KDF1-202ENST00000616918 1651 ntTSL 2 BASIC12.36□□□□□ -0.43
CSMD1Q96PZ7 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC12.36□□□□□ -0.43
CSMD1Q96PZ7 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CSMD1Q96PZ7 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CSMD1Q96PZ7 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
CSMD1Q96PZ7 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
CSMD1Q96PZ7 HLF-202ENST00000430986 1385 ntTSL 2 BASIC12.36□□□□□ -0.43
CSMD1Q96PZ7 MAD2L1BP-201ENST00000372171 1301 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CSMD1Q96PZ7 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CSMD1Q96PZ7 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC12.35□□□□□ -0.43
CSMD1Q96PZ7 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CSMD1Q96PZ7 OLA1P2-201ENST00000395519 1264 ntBASIC12.35□□□□□ -0.43
CSMD1Q96PZ7 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC12.35□□□□□ -0.43
CSMD1Q96PZ7 XBP1P1-201ENST00000436573 652 ntBASIC12.35□□□□□ -0.43
CSMD1Q96PZ7 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC12.35□□□□□ -0.43
CSMD1Q96PZ7 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC12.35□□□□□ -0.43
CSMD1Q96PZ7 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC12.35□□□□□ -0.43
CSMD1Q96PZ7 NAT9-219ENST00000582524 573 ntTSL 4 BASIC12.35□□□□□ -0.43
CSMD1Q96PZ7 BIRC5-211ENST00000592734 386 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CSMD1Q96PZ7 AL022334.2-201ENST00000610000 484 ntBASIC12.35□□□□□ -0.43
CSMD1Q96PZ7 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC12.35□□□□□ -0.43
CSMD1Q96PZ7 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC12.35□□□□□ -0.43
CSMD1Q96PZ7 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CSMD1Q96PZ7 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms