Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
RTN4IP1Q8WWV3 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC12.63□□□□□ -0.39
RTN4IP1Q8WWV3 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RTN4IP1Q8WWV3 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RTN4IP1Q8WWV3 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
RTN4IP1Q8WWV3 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RTN4IP1Q8WWV3 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RTN4IP1Q8WWV3 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RTN4IP1Q8WWV3 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
RTN4IP1Q8WWV3 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RTN4IP1Q8WWV3 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RTN4IP1Q8WWV3 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
RTN4IP1Q8WWV3 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RTN4IP1Q8WWV3 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC12.63□□□□□ -0.39
RTN4IP1Q8WWV3 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC12.63□□□□□ -0.39
RTN4IP1Q8WWV3 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC12.63□□□□□ -0.39
RTN4IP1Q8WWV3 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC12.63□□□□□ -0.39
RTN4IP1Q8WWV3 AC027796.2-201ENST00000575326 344 ntBASIC12.63□□□□□ -0.39
RTN4IP1Q8WWV3 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
RTN4IP1Q8WWV3 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RTN4IP1Q8WWV3 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC12.63□□□□□ -0.39
RTN4IP1Q8WWV3 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RTN4IP1Q8WWV3 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC12.63□□□□□ -0.39
RTN4IP1Q8WWV3 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC12.63□□□□□ -0.39
RTN4IP1Q8WWV3 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RTN4IP1Q8WWV3 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC12.63□□□□□ -0.39
RTN4IP1Q8WWV3 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RTN4IP1Q8WWV3 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
RTN4IP1Q8WWV3 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RTN4IP1Q8WWV3 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
RTN4IP1Q8WWV3 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
RTN4IP1Q8WWV3 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
RTN4IP1Q8WWV3 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
RTN4IP1Q8WWV3 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
RTN4IP1Q8WWV3 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RTN4IP1Q8WWV3 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
RTN4IP1Q8WWV3 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC12.62□□□□□ -0.39
RTN4IP1Q8WWV3 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC12.62□□□□□ -0.39
RTN4IP1Q8WWV3 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
RTN4IP1Q8WWV3 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
RTN4IP1Q8WWV3 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC12.62□□□□□ -0.39
RTN4IP1Q8WWV3 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
RTN4IP1Q8WWV3 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RTN4IP1Q8WWV3 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC12.62□□□□□ -0.39
RTN4IP1Q8WWV3 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
RTN4IP1Q8WWV3 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RTN4IP1Q8WWV3 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RTN4IP1Q8WWV3 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
RTN4IP1Q8WWV3 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
RTN4IP1Q8WWV3 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC12.62□□□□□ -0.39
RTN4IP1Q8WWV3 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
RTN4IP1Q8WWV3 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC12.62□□□□□ -0.39
RTN4IP1Q8WWV3 TP73-209ENST00000603362 1668 ntTSL 5 BASIC12.62□□□□□ -0.39
RTN4IP1Q8WWV3 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RTN4IP1Q8WWV3 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RTN4IP1Q8WWV3 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RTN4IP1Q8WWV3 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC12.62□□□□□ -0.39
RTN4IP1Q8WWV3 MRPS18AP1-201ENST00000414458 589 ntBASIC12.62□□□□□ -0.39
RTN4IP1Q8WWV3 HNRNPA1P40-201ENST00000426371 1278 ntBASIC12.62□□□□□ -0.39
RTN4IP1Q8WWV3 RASL12-203ENST00000434605 982 ntTSL 2 BASIC12.62□□□□□ -0.39
RTN4IP1Q8WWV3 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RTN4IP1Q8WWV3 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC12.62□□□□□ -0.39
RTN4IP1Q8WWV3 MEIS3P1-201ENST00000495167 958 ntBASIC12.62□□□□□ -0.39
RTN4IP1Q8WWV3 NAA60-208ENST00000570819 833 ntTSL 2 BASIC12.62□□□□□ -0.39
RTN4IP1Q8WWV3 SRD5A3P1-201ENST00000603021 949 ntBASIC12.62□□□□□ -0.39
RTN4IP1Q8WWV3 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC12.62□□□□□ -0.39
RTN4IP1Q8WWV3 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC12.62□□□□□ -0.39
RTN4IP1Q8WWV3 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC12.62□□□□□ -0.39
RTN4IP1Q8WWV3 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RTN4IP1Q8WWV3 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
RTN4IP1Q8WWV3 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RTN4IP1Q8WWV3 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RTN4IP1Q8WWV3 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
RTN4IP1Q8WWV3 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC12.62□□□□□ -0.39
RTN4IP1Q8WWV3 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC12.62□□□□□ -0.39
RTN4IP1Q8WWV3 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC12.62□□□□□ -0.39
RTN4IP1Q8WWV3 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RTN4IP1Q8WWV3 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RTN4IP1Q8WWV3 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC12.62□□□□□ -0.39
RTN4IP1Q8WWV3 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RTN4IP1Q8WWV3 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RTN4IP1Q8WWV3 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
RTN4IP1Q8WWV3 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RTN4IP1Q8WWV3 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RTN4IP1Q8WWV3 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
RTN4IP1Q8WWV3 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RTN4IP1Q8WWV3 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RTN4IP1Q8WWV3 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RTN4IP1Q8WWV3 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RTN4IP1Q8WWV3 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RTN4IP1Q8WWV3 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC12.61□□□□□ -0.39
RTN4IP1Q8WWV3 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC12.61□□□□□ -0.39
RTN4IP1Q8WWV3 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
RTN4IP1Q8WWV3 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RTN4IP1Q8WWV3 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RTN4IP1Q8WWV3 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
RTN4IP1Q8WWV3 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
RTN4IP1Q8WWV3 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC12.61□□□□□ -0.39
RTN4IP1Q8WWV3 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RTN4IP1Q8WWV3 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms