Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC60Q8IWA6 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC60Q8IWA6 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC60Q8IWA6 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC60Q8IWA6 FAM90A7P-201ENST00000382628 1395 ntBASIC16.47■□□□□ 0.23
CCDC60Q8IWA6 FAM90A23P-201ENST00000400136 1395 ntBASIC16.47■□□□□ 0.23
CCDC60Q8IWA6 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.47■□□□□ 0.23
CCDC60Q8IWA6 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.47■□□□□ 0.23
CCDC60Q8IWA6 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC60Q8IWA6 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC60Q8IWA6 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC60Q8IWA6 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
CCDC60Q8IWA6 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC60Q8IWA6 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC60Q8IWA6 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC16.46■□□□□ 0.23
CCDC60Q8IWA6 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC60Q8IWA6 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CCDC60Q8IWA6 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC60Q8IWA6 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC60Q8IWA6 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC60Q8IWA6 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
CCDC60Q8IWA6 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC60Q8IWA6 KRTAP19-9P-201ENST00000421795 191 ntBASIC16.46■□□□□ 0.23
CCDC60Q8IWA6 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC16.46■□□□□ 0.23
CCDC60Q8IWA6 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC16.46■□□□□ 0.23
CCDC60Q8IWA6 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC60Q8IWA6 TSACC-208ENST00000481479 741 ntTSL 2 BASIC16.46■□□□□ 0.23
CCDC60Q8IWA6 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC16.46■□□□□ 0.23
CCDC60Q8IWA6 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC16.46■□□□□ 0.23
CCDC60Q8IWA6 AP000346.4-201ENST00000614827 381 ntBASIC16.46■□□□□ 0.23
CCDC60Q8IWA6 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC16.46■□□□□ 0.23
CCDC60Q8IWA6 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC16.46■□□□□ 0.23
CCDC60Q8IWA6 KRT8P28-201ENST00000433288 1390 ntBASIC16.46■□□□□ 0.23
CCDC60Q8IWA6 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CCDC60Q8IWA6 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC16.46■□□□□ 0.23
CCDC60Q8IWA6 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.46■□□□□ 0.23
CCDC60Q8IWA6 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC60Q8IWA6 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC60Q8IWA6 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC60Q8IWA6 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC60Q8IWA6 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
CCDC60Q8IWA6 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CCDC60Q8IWA6 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC60Q8IWA6 AC006504.5-208ENST00000588784 2401 ntBASIC16.46■□□□□ 0.23
CCDC60Q8IWA6 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CCDC60Q8IWA6 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
CCDC60Q8IWA6 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
CCDC60Q8IWA6 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.46■□□□□ 0.22
CCDC60Q8IWA6 MX1-218ENST00000619682 1980 ntTSL 5 BASIC16.46■□□□□ 0.22
CCDC60Q8IWA6 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC60Q8IWA6 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC60Q8IWA6 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CCDC60Q8IWA6 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC60Q8IWA6 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC16.45■□□□□ 0.22
CCDC60Q8IWA6 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC16.45■□□□□ 0.22
CCDC60Q8IWA6 USP35-204ENST00000530267 2419 ntTSL 2 BASIC16.45■□□□□ 0.22
CCDC60Q8IWA6 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.45■□□□□ 0.22
CCDC60Q8IWA6 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.45■□□□□ 0.22
CCDC60Q8IWA6 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC60Q8IWA6 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
CCDC60Q8IWA6 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC60Q8IWA6 PTPA-215ENST00000432124 567 ntTSL 4 BASIC16.45■□□□□ 0.22
CCDC60Q8IWA6 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC16.45■□□□□ 0.22
CCDC60Q8IWA6 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CCDC60Q8IWA6 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC16.45■□□□□ 0.22
CCDC60Q8IWA6 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC16.45■□□□□ 0.22
CCDC60Q8IWA6 SYT17-208ENST00000568433 812 ntTSL 3 BASIC16.45■□□□□ 0.22
CCDC60Q8IWA6 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC16.45■□□□□ 0.22
CCDC60Q8IWA6 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC16.45■□□□□ 0.22
CCDC60Q8IWA6 AC009884.2-201ENST00000603110 324 ntBASIC16.45■□□□□ 0.22
CCDC60Q8IWA6 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC60Q8IWA6 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC60Q8IWA6 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC60Q8IWA6 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC60Q8IWA6 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC60Q8IWA6 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
CCDC60Q8IWA6 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC60Q8IWA6 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC60Q8IWA6 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC16.45■□□□□ 0.22
CCDC60Q8IWA6 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CCDC60Q8IWA6 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CCDC60Q8IWA6 R3HDM2P2-201ENST00000401880 2116 ntBASIC16.45■□□□□ 0.22
CCDC60Q8IWA6 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC60Q8IWA6 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC60Q8IWA6 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC60Q8IWA6 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.45■□□□□ 0.22
CCDC60Q8IWA6 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CCDC60Q8IWA6 TMBIM7P-202ENST00000641474 1516 ntBASIC16.45■□□□□ 0.22
CCDC60Q8IWA6 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
CCDC60Q8IWA6 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC16.45■□□□□ 0.22
CCDC60Q8IWA6 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC60Q8IWA6 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC60Q8IWA6 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC60Q8IWA6 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.44■□□□□ 0.22
CCDC60Q8IWA6 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.44■□□□□ 0.22
CCDC60Q8IWA6 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC60Q8IWA6 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC60Q8IWA6 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CCDC60Q8IWA6 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC16.44■□□□□ 0.22
CCDC60Q8IWA6 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms