Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC18.28■□□□□ 0.52
COL23A1Q86Y22 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL23A1Q86Y22 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
COL23A1Q86Y22 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
COL23A1Q86Y22 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
COL23A1Q86Y22 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC18.28■□□□□ 0.52
COL23A1Q86Y22 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC18.28■□□□□ 0.52
COL23A1Q86Y22 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL23A1Q86Y22 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL23A1Q86Y22 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL23A1Q86Y22 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
COL23A1Q86Y22 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC18.28■□□□□ 0.52
COL23A1Q86Y22 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC18.28■□□□□ 0.52
COL23A1Q86Y22 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC18.28■□□□□ 0.52
COL23A1Q86Y22 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC18.28■□□□□ 0.52
COL23A1Q86Y22 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC18.28■□□□□ 0.52
COL23A1Q86Y22 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC18.28■□□□□ 0.52
COL23A1Q86Y22 HINT1-205ENST00000508488 703 ntTSL 2 BASIC18.28■□□□□ 0.52
COL23A1Q86Y22 AC090136.2-201ENST00000517809 420 ntBASIC18.28■□□□□ 0.52
COL23A1Q86Y22 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
COL23A1Q86Y22 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC18.28■□□□□ 0.52
COL23A1Q86Y22 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC18.28■□□□□ 0.52
COL23A1Q86Y22 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC18.28■□□□□ 0.52
COL23A1Q86Y22 PTPN20CP-201ENST00000614090 920 ntBASIC18.28■□□□□ 0.52
COL23A1Q86Y22 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
COL23A1Q86Y22 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL23A1Q86Y22 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC18.28■□□□□ 0.52
COL23A1Q86Y22 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL23A1Q86Y22 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC18.28■□□□□ 0.52
COL23A1Q86Y22 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL23A1Q86Y22 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC18.28■□□□□ 0.52
COL23A1Q86Y22 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC18.28■□□□□ 0.52
COL23A1Q86Y22 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL23A1Q86Y22 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC18.28■□□□□ 0.52
COL23A1Q86Y22 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL23A1Q86Y22 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC18.28■□□□□ 0.52
COL23A1Q86Y22 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL23A1Q86Y22 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL23A1Q86Y22 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL23A1Q86Y22 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
COL23A1Q86Y22 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.28■□□□□ 0.52
COL23A1Q86Y22 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL23A1Q86Y22 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COL23A1Q86Y22 AGGF1P1-201ENST00000509500 2073 ntBASIC18.27■□□□□ 0.52
COL23A1Q86Y22 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC18.27■□□□□ 0.52
COL23A1Q86Y22 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
COL23A1Q86Y22 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC18.27■□□□□ 0.52
COL23A1Q86Y22 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.27■□□□□ 0.52
COL23A1Q86Y22 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
COL23A1Q86Y22 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.27■□□□□ 0.52
COL23A1Q86Y22 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
COL23A1Q86Y22 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COL23A1Q86Y22 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC18.27■□□□□ 0.52
COL23A1Q86Y22 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COL23A1Q86Y22 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
COL23A1Q86Y22 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
COL23A1Q86Y22 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
COL23A1Q86Y22 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
COL23A1Q86Y22 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
COL23A1Q86Y22 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
COL23A1Q86Y22 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COL23A1Q86Y22 AL929302.1-201ENST00000426556 871 ntBASIC18.27■□□□□ 0.52
COL23A1Q86Y22 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
COL23A1Q86Y22 AC098934.1-203ENST00000442868 1262 ntBASIC18.27■□□□□ 0.52
COL23A1Q86Y22 VENTXP4-201ENST00000449029 958 ntBASIC18.27■□□□□ 0.52
COL23A1Q86Y22 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
COL23A1Q86Y22 BPIFB5P-201ENST00000457066 1099 ntBASIC18.27■□□□□ 0.52
COL23A1Q86Y22 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
COL23A1Q86Y22 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC18.27■□□□□ 0.52
COL23A1Q86Y22 ALG1L3P-201ENST00000503331 765 ntBASIC18.27■□□□□ 0.52
COL23A1Q86Y22 IGHV1-12-201ENST00000518307 205 ntBASIC18.27■□□□□ 0.52
COL23A1Q86Y22 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC18.27■□□□□ 0.52
COL23A1Q86Y22 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC18.27■□□□□ 0.52
COL23A1Q86Y22 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
COL23A1Q86Y22 AC092862.1-201ENST00000541534 533 ntBASIC18.27■□□□□ 0.52
COL23A1Q86Y22 AC013553.1-201ENST00000560906 267 ntBASIC18.27■□□□□ 0.52
COL23A1Q86Y22 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC18.27■□□□□ 0.52
COL23A1Q86Y22 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
COL23A1Q86Y22 TP53-221ENST00000615910 1149 ntTSL 5 BASIC18.27■□□□□ 0.52
COL23A1Q86Y22 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
COL23A1Q86Y22 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC18.27■□□□□ 0.52
COL23A1Q86Y22 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COL23A1Q86Y22 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC18.27■□□□□ 0.52
COL23A1Q86Y22 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
COL23A1Q86Y22 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
COL23A1Q86Y22 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
COL23A1Q86Y22 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
COL23A1Q86Y22 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
COL23A1Q86Y22 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL23A1Q86Y22 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COL23A1Q86Y22 AL591122.2-201ENST00000624125 1853 ntBASIC18.26■□□□□ 0.51
COL23A1Q86Y22 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL23A1Q86Y22 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC18.26■□□□□ 0.51
COL23A1Q86Y22 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL23A1Q86Y22 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL23A1Q86Y22 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
COL23A1Q86Y22 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL23A1Q86Y22 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COL23A1Q86Y22 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.26■□□□□ 0.51
COL23A1Q86Y22 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms