Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LRRTM1Q86UE6 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LRRTM1Q86UE6 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.99□□□□□ -0.33
LRRTM1Q86UE6 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
LRRTM1Q86UE6 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC12.99□□□□□ -0.33
LRRTM1Q86UE6 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
LRRTM1Q86UE6 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LRRTM1Q86UE6 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
LRRTM1Q86UE6 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LRRTM1Q86UE6 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LRRTM1Q86UE6 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LRRTM1Q86UE6 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
LRRTM1Q86UE6 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC12.98□□□□□ -0.33
LRRTM1Q86UE6 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LRRTM1Q86UE6 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
LRRTM1Q86UE6 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
LRRTM1Q86UE6 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
LRRTM1Q86UE6 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LRRTM1Q86UE6 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LRRTM1Q86UE6 RERG-209ENST00000546331 1383 ntTSL 2 BASIC12.98□□□□□ -0.33
LRRTM1Q86UE6 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LRRTM1Q86UE6 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LRRTM1Q86UE6 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC12.98□□□□□ -0.33
LRRTM1Q86UE6 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LRRTM1Q86UE6 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
LRRTM1Q86UE6 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LRRTM1Q86UE6 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LRRTM1Q86UE6 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LRRTM1Q86UE6 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
LRRTM1Q86UE6 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC12.98□□□□□ -0.33
LRRTM1Q86UE6 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LRRTM1Q86UE6 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LRRTM1Q86UE6 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LRRTM1Q86UE6 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC12.98□□□□□ -0.33
LRRTM1Q86UE6 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC12.98□□□□□ -0.33
LRRTM1Q86UE6 DNAJB3-201ENST00000446806 729 ntBASIC12.98□□□□□ -0.33
LRRTM1Q86UE6 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC12.98□□□□□ -0.33
LRRTM1Q86UE6 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC12.98□□□□□ -0.33
LRRTM1Q86UE6 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC12.98□□□□□ -0.33
LRRTM1Q86UE6 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
LRRTM1Q86UE6 AC092337.1-201ENST00000568699 1129 ntBASIC12.98□□□□□ -0.33
LRRTM1Q86UE6 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LRRTM1Q86UE6 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC12.98□□□□□ -0.33
LRRTM1Q86UE6 AL391069.4-201ENST00000609583 481 ntBASIC12.98□□□□□ -0.33
LRRTM1Q86UE6 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC12.98□□□□□ -0.33
LRRTM1Q86UE6 HADH-202ENST00000403312 1752 ntTSL 5 BASIC12.98□□□□□ -0.33
LRRTM1Q86UE6 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
LRRTM1Q86UE6 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LRRTM1Q86UE6 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC12.98□□□□□ -0.33
LRRTM1Q86UE6 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LRRTM1Q86UE6 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
LRRTM1Q86UE6 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LRRTM1Q86UE6 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC12.98□□□□□ -0.33
LRRTM1Q86UE6 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LRRTM1Q86UE6 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
LRRTM1Q86UE6 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LRRTM1Q86UE6 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC12.98□□□□□ -0.33
LRRTM1Q86UE6 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LRRTM1Q86UE6 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LRRTM1Q86UE6 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
LRRTM1Q86UE6 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LRRTM1Q86UE6 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LRRTM1Q86UE6 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC12.98□□□□□ -0.33
LRRTM1Q86UE6 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LRRTM1Q86UE6 AL356585.2-201ENST00000625078 2396 ntBASIC12.98□□□□□ -0.33
LRRTM1Q86UE6 PPT1-213ENST00000641319 2388 ntBASIC12.98□□□□□ -0.33
LRRTM1Q86UE6 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LRRTM1Q86UE6 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC12.98□□□□□ -0.33
LRRTM1Q86UE6 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC12.97□□□□□ -0.33
LRRTM1Q86UE6 Z82170.1-201ENST00000625081 3192 ntBASIC12.97□□□□□ -0.33
LRRTM1Q86UE6 GSN-209ENST00000449733 2702 ntTSL 2 BASIC12.97□□□□□ -0.33
LRRTM1Q86UE6 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LRRTM1Q86UE6 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LRRTM1Q86UE6 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC12.97□□□□□ -0.33
LRRTM1Q86UE6 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LRRTM1Q86UE6 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
LRRTM1Q86UE6 DRD5P1-201ENST00000456605 1438 ntBASIC12.97□□□□□ -0.33
LRRTM1Q86UE6 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC12.97□□□□□ -0.33
LRRTM1Q86UE6 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LRRTM1Q86UE6 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.97□□□□□ -0.33
LRRTM1Q86UE6 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
LRRTM1Q86UE6 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC12.97□□□□□ -0.33
LRRTM1Q86UE6 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
LRRTM1Q86UE6 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC12.97□□□□□ -0.33
LRRTM1Q86UE6 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC12.97□□□□□ -0.33
LRRTM1Q86UE6 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
LRRTM1Q86UE6 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LRRTM1Q86UE6 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
LRRTM1Q86UE6 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC12.97□□□□□ -0.33
LRRTM1Q86UE6 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LRRTM1Q86UE6 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
LRRTM1Q86UE6 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LRRTM1Q86UE6 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LRRTM1Q86UE6 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LRRTM1Q86UE6 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LRRTM1Q86UE6 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
LRRTM1Q86UE6 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC12.97□□□□□ -0.33
LRRTM1Q86UE6 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
LRRTM1Q86UE6 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LRRTM1Q86UE6 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms