Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 AC105137.3-201ENST00000617588 984 ntBASIC14.46□□□□□ -0.09
LYSMD4Q5XG99 AC025262.2-201ENST00000623975 1056 ntBASIC14.46□□□□□ -0.09
LYSMD4Q5XG99 AP001184.1-201ENST00000637936 376 ntBASIC14.46□□□□□ -0.09
LYSMD4Q5XG99 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC14.46□□□□□ -0.09
LYSMD4Q5XG99 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LYSMD4Q5XG99 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LYSMD4Q5XG99 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LYSMD4Q5XG99 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.46□□□□□ -0.09
LYSMD4Q5XG99 REXO1L2P-201ENST00000425429 2069 ntBASIC14.46□□□□□ -0.09
LYSMD4Q5XG99 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
LYSMD4Q5XG99 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LYSMD4Q5XG99 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LYSMD4Q5XG99 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LYSMD4Q5XG99 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
LYSMD4Q5XG99 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC14.46□□□□□ -0.1
LYSMD4Q5XG99 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
LYSMD4Q5XG99 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.45□□□□□ -0.1
LYSMD4Q5XG99 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LYSMD4Q5XG99 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.45□□□□□ -0.1
LYSMD4Q5XG99 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
LYSMD4Q5XG99 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LYSMD4Q5XG99 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LYSMD4Q5XG99 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.45□□□□□ -0.1
LYSMD4Q5XG99 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
LYSMD4Q5XG99 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LYSMD4Q5XG99 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LYSMD4Q5XG99 MIR1227-201ENST00000408484 88 ntBASIC14.45□□□□□ -0.1
LYSMD4Q5XG99 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC14.45□□□□□ -0.1
LYSMD4Q5XG99 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC14.45□□□□□ -0.1
LYSMD4Q5XG99 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC14.45□□□□□ -0.1
LYSMD4Q5XG99 AC092638.2-201ENST00000441105 947 ntBASIC14.45□□□□□ -0.1
LYSMD4Q5XG99 LYPLA2P1-203ENST00000447689 696 ntBASIC14.45□□□□□ -0.1
LYSMD4Q5XG99 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
LYSMD4Q5XG99 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.45□□□□□ -0.1
LYSMD4Q5XG99 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
LYSMD4Q5XG99 MRPL22P1-201ENST00000505398 616 ntBASIC14.45□□□□□ -0.1
LYSMD4Q5XG99 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC14.45□□□□□ -0.1
LYSMD4Q5XG99 AC003686.1-201ENST00000550956 1034 ntBASIC14.45□□□□□ -0.1
LYSMD4Q5XG99 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC14.45□□□□□ -0.1
LYSMD4Q5XG99 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC14.45□□□□□ -0.1
LYSMD4Q5XG99 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LYSMD4Q5XG99 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC14.45□□□□□ -0.1
LYSMD4Q5XG99 AC084781.1-201ENST00000613737 656 ntBASIC14.45□□□□□ -0.1
LYSMD4Q5XG99 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LYSMD4Q5XG99 AC127024.7-201ENST00000625101 200 ntBASIC14.45□□□□□ -0.1
LYSMD4Q5XG99 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
LYSMD4Q5XG99 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
LYSMD4Q5XG99 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.45□□□□□ -0.1
LYSMD4Q5XG99 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LYSMD4Q5XG99 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.45□□□□□ -0.1
LYSMD4Q5XG99 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LYSMD4Q5XG99 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LYSMD4Q5XG99 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
LYSMD4Q5XG99 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LYSMD4Q5XG99 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LYSMD4Q5XG99 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LYSMD4Q5XG99 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
LYSMD4Q5XG99 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.45□□□□□ -0.1
LYSMD4Q5XG99 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LYSMD4Q5XG99 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LYSMD4Q5XG99 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC14.44□□□□□ -0.1
LYSMD4Q5XG99 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
LYSMD4Q5XG99 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
LYSMD4Q5XG99 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LYSMD4Q5XG99 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.44□□□□□ -0.1
LYSMD4Q5XG99 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
LYSMD4Q5XG99 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LYSMD4Q5XG99 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC14.44□□□□□ -0.1
LYSMD4Q5XG99 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
LYSMD4Q5XG99 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
LYSMD4Q5XG99 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LYSMD4Q5XG99 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LYSMD4Q5XG99 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LYSMD4Q5XG99 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC14.44□□□□□ -0.1
LYSMD4Q5XG99 AC009093.10-201ENST00000641956 1442 ntBASIC14.44□□□□□ -0.1
LYSMD4Q5XG99 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
LYSMD4Q5XG99 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LYSMD4Q5XG99 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LYSMD4Q5XG99 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
LYSMD4Q5XG99 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
LYSMD4Q5XG99 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LYSMD4Q5XG99 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC14.44□□□□□ -0.1
LYSMD4Q5XG99 AL354861.1-201ENST00000445213 355 ntBASIC14.44□□□□□ -0.1
LYSMD4Q5XG99 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
LYSMD4Q5XG99 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC14.44□□□□□ -0.1
LYSMD4Q5XG99 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC14.44□□□□□ -0.1
LYSMD4Q5XG99 TMCO5B-205ENST00000530020 894 ntBASIC14.44□□□□□ -0.1
LYSMD4Q5XG99 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC14.44□□□□□ -0.1
LYSMD4Q5XG99 MT3-203ENST00000565838 421 ntTSL 3 BASIC14.44□□□□□ -0.1
LYSMD4Q5XG99 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LYSMD4Q5XG99 AC005357.2-202ENST00000590507 1060 ntBASIC14.44□□□□□ -0.1
LYSMD4Q5XG99 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LYSMD4Q5XG99 AL022334.2-201ENST00000610000 484 ntBASIC14.44□□□□□ -0.1
LYSMD4Q5XG99 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC14.44□□□□□ -0.1
LYSMD4Q5XG99 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
LYSMD4Q5XG99 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC14.44□□□□□ -0.1
LYSMD4Q5XG99 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
LYSMD4Q5XG99 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
LYSMD4Q5XG99 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
LYSMD4Q5XG99 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms