Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 AC244394.1-201ENST00000435000 1665 ntBASIC17.06■□□□□ 0.32
USH1GQ495M9 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USH1GQ495M9 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
USH1GQ495M9 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
USH1GQ495M9 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
USH1GQ495M9 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
USH1GQ495M9 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
USH1GQ495M9 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
USH1GQ495M9 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
USH1GQ495M9 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
USH1GQ495M9 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
USH1GQ495M9 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
USH1GQ495M9 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
USH1GQ495M9 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC17.05■□□□□ 0.32
USH1GQ495M9 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
USH1GQ495M9 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC17.05■□□□□ 0.32
USH1GQ495M9 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
USH1GQ495M9 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
USH1GQ495M9 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
USH1GQ495M9 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
USH1GQ495M9 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
USH1GQ495M9 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC17.05■□□□□ 0.32
USH1GQ495M9 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
USH1GQ495M9 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC17.05■□□□□ 0.32
USH1GQ495M9 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
USH1GQ495M9 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
USH1GQ495M9 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC17.05■□□□□ 0.32
USH1GQ495M9 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
USH1GQ495M9 AC005077.2-201ENST00000449786 690 ntBASIC17.05■□□□□ 0.32
USH1GQ495M9 CICP12-201ENST00000455801 843 ntBASIC17.05■□□□□ 0.32
USH1GQ495M9 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
USH1GQ495M9 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC17.05■□□□□ 0.32
USH1GQ495M9 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC17.05■□□□□ 0.32
USH1GQ495M9 IGHV3OR16-16-201ENST00000563644 343 ntBASIC17.05■□□□□ 0.32
USH1GQ495M9 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
USH1GQ495M9 PCBP2-OT1-201ENST00000634357 590 ntBASIC17.05■□□□□ 0.32
USH1GQ495M9 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC17.05■□□□□ 0.32
USH1GQ495M9 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
USH1GQ495M9 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
USH1GQ495M9 RER1-203ENST00000378513 3000 ntTSL 3 BASIC17.05■□□□□ 0.32
USH1GQ495M9 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
USH1GQ495M9 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
USH1GQ495M9 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
USH1GQ495M9 AC104640.1-201ENST00000562617 2109 ntBASIC17.05■□□□□ 0.32
USH1GQ495M9 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
USH1GQ495M9 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
USH1GQ495M9 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
USH1GQ495M9 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
USH1GQ495M9 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
USH1GQ495M9 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC17.04■□□□□ 0.32
USH1GQ495M9 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
USH1GQ495M9 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
USH1GQ495M9 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
USH1GQ495M9 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC17.04■□□□□ 0.32
USH1GQ495M9 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
USH1GQ495M9 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
USH1GQ495M9 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
USH1GQ495M9 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
USH1GQ495M9 AL136172.1-201ENST00000598590 1394 ntBASIC17.04■□□□□ 0.32
USH1GQ495M9 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
USH1GQ495M9 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
USH1GQ495M9 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
USH1GQ495M9 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
USH1GQ495M9 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
USH1GQ495M9 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC17.04■□□□□ 0.32
USH1GQ495M9 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
USH1GQ495M9 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
USH1GQ495M9 DEF8-202ENST00000418391 852 ntTSL 2 BASIC17.04■□□□□ 0.32
USH1GQ495M9 AC016700.1-201ENST00000429424 312 ntBASIC17.04■□□□□ 0.32
USH1GQ495M9 PUDPP3-201ENST00000445368 636 ntBASIC17.04■□□□□ 0.32
USH1GQ495M9 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC17.04■□□□□ 0.32
USH1GQ495M9 AC104073.2-201ENST00000453737 312 ntBASIC17.04■□□□□ 0.32
USH1GQ495M9 TUBB8P8-201ENST00000458717 1058 ntBASIC17.04■□□□□ 0.32
USH1GQ495M9 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC17.04■□□□□ 0.32
USH1GQ495M9 TPI1-206ENST00000488464 791 ntTSL 5 BASIC17.04■□□□□ 0.32
USH1GQ495M9 NEU3-202ENST00000526068 431 ntTSL 2 BASIC17.04■□□□□ 0.32
USH1GQ495M9 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC17.04■□□□□ 0.32
USH1GQ495M9 VPS18-202ENST00000558474 873 ntTSL 3 BASIC17.04■□□□□ 0.32
USH1GQ495M9 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
USH1GQ495M9 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC17.04■□□□□ 0.32
USH1GQ495M9 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC17.04■□□□□ 0.32
USH1GQ495M9 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
USH1GQ495M9 AC004923.1-202ENST00000642106 209 ntBASIC17.04■□□□□ 0.32
USH1GQ495M9 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC17.04■□□□□ 0.32
USH1GQ495M9 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
USH1GQ495M9 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
USH1GQ495M9 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
USH1GQ495M9 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
USH1GQ495M9 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC17.04■□□□□ 0.32
USH1GQ495M9 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
USH1GQ495M9 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
USH1GQ495M9 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
USH1GQ495M9 AL161772.1-201ENST00000610494 4412 ntBASIC17.04■□□□□ 0.32
USH1GQ495M9 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
USH1GQ495M9 POR-201ENST00000394893 2532 ntTSL 5 BASIC17.04■□□□□ 0.32
USH1GQ495M9 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC17.04■□□□□ 0.32
USH1GQ495M9 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
USH1GQ495M9 AMT-239ENST00000636865 1914 ntTSL 5 BASIC17.04■□□□□ 0.32
USH1GQ495M9 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
USH1GQ495M9 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms