Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NKX6-1P78426 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NKX6-1P78426 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.23□□□□□ -0.29
NKX6-1P78426 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NKX6-1P78426 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC13.23□□□□□ -0.29
NKX6-1P78426 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NKX6-1P78426 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NKX6-1P78426 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.23□□□□□ -0.29
NKX6-1P78426 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
NKX6-1P78426 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NKX6-1P78426 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
NKX6-1P78426 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.23□□□□□ -0.29
NKX6-1P78426 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.23□□□□□ -0.29
NKX6-1P78426 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.23□□□□□ -0.29
NKX6-1P78426 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NKX6-1P78426 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NKX6-1P78426 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NKX6-1P78426 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NKX6-1P78426 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.23□□□□□ -0.29
NKX6-1P78426 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NKX6-1P78426 GRN-222ENST00000639447 1314 ntTSL 2 BASIC13.23□□□□□ -0.29
NKX6-1P78426 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
NKX6-1P78426 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
NKX6-1P78426 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.23□□□□□ -0.29
NKX6-1P78426 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
NKX6-1P78426 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
NKX6-1P78426 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NKX6-1P78426 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NKX6-1P78426 AL645937.2-201ENST00000396808 931 ntBASIC13.23□□□□□ -0.29
NKX6-1P78426 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.23□□□□□ -0.29
NKX6-1P78426 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.23□□□□□ -0.29
NKX6-1P78426 NUS1P3-201ENST00000423502 862 ntBASIC13.23□□□□□ -0.29
NKX6-1P78426 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.23□□□□□ -0.29
NKX6-1P78426 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC13.23□□□□□ -0.29
NKX6-1P78426 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC13.23□□□□□ -0.29
NKX6-1P78426 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC13.23□□□□□ -0.29
NKX6-1P78426 AKR7A2P1-201ENST00000460134 915 ntBASIC13.23□□□□□ -0.29
NKX6-1P78426 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NKX6-1P78426 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC13.23□□□□□ -0.29
NKX6-1P78426 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC13.23□□□□□ -0.29
NKX6-1P78426 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
NKX6-1P78426 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NKX6-1P78426 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC13.23□□□□□ -0.29
NKX6-1P78426 SAMD11P1-201ENST00000571429 661 ntBASIC13.23□□□□□ -0.29
NKX6-1P78426 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
NKX6-1P78426 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NKX6-1P78426 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC13.23□□□□□ -0.29
NKX6-1P78426 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.23□□□□□ -0.29
NKX6-1P78426 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NKX6-1P78426 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NKX6-1P78426 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
NKX6-1P78426 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NKX6-1P78426 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NKX6-1P78426 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.23□□□□□ -0.29
NKX6-1P78426 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NKX6-1P78426 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NKX6-1P78426 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
NKX6-1P78426 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NKX6-1P78426 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
NKX6-1P78426 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NKX6-1P78426 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
NKX6-1P78426 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
NKX6-1P78426 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NKX6-1P78426 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NKX6-1P78426 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NKX6-1P78426 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.23□□□□□ -0.29
NKX6-1P78426 AC087481.3-201ENST00000602886 1894 ntBASIC13.23□□□□□ -0.29
NKX6-1P78426 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NKX6-1P78426 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NKX6-1P78426 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.23□□□□□ -0.29
NKX6-1P78426 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NKX6-1P78426 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
NKX6-1P78426 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
NKX6-1P78426 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NKX6-1P78426 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
NKX6-1P78426 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NKX6-1P78426 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.22□□□□□ -0.29
NKX6-1P78426 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NKX6-1P78426 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NKX6-1P78426 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.22□□□□□ -0.29
NKX6-1P78426 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.22□□□□□ -0.29
NKX6-1P78426 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NKX6-1P78426 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.22□□□□□ -0.29
NKX6-1P78426 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NKX6-1P78426 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NKX6-1P78426 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.22□□□□□ -0.29
NKX6-1P78426 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NKX6-1P78426 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NKX6-1P78426 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NKX6-1P78426 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
NKX6-1P78426 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NKX6-1P78426 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.22□□□□□ -0.29
NKX6-1P78426 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NKX6-1P78426 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
NKX6-1P78426 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
NKX6-1P78426 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
NKX6-1P78426 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC13.22□□□□□ -0.29
NKX6-1P78426 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC13.22□□□□□ -0.29
NKX6-1P78426 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
NKX6-1P78426 PFN2-215ENST00000497148 743 ntTSL 4 BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms