Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 PCDHA1-201ENST00000378133 2726 ntBASIC16.79■□□□□ 0.28
CCNA1P78396 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.79■□□□□ 0.28
CCNA1P78396 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCNA1P78396 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCNA1P78396 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC16.79■□□□□ 0.28
CCNA1P78396 RNA5SP359-201ENST00000364838 113 ntBASIC16.79■□□□□ 0.28
CCNA1P78396 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC16.79■□□□□ 0.28
CCNA1P78396 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC16.79■□□□□ 0.28
CCNA1P78396 AL807761.2-201ENST00000422849 729 ntBASIC16.79■□□□□ 0.28
CCNA1P78396 PFN2-202ENST00000423691 911 ntTSL 2 BASIC16.79■□□□□ 0.28
CCNA1P78396 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC16.79■□□□□ 0.28
CCNA1P78396 AC114947.1-202ENST00000514136 344 ntBASIC16.79■□□□□ 0.28
CCNA1P78396 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC16.79■□□□□ 0.28
CCNA1P78396 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC16.79■□□□□ 0.28
CCNA1P78396 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC16.79■□□□□ 0.28
CCNA1P78396 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC16.79■□□□□ 0.28
CCNA1P78396 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC16.79■□□□□ 0.28
CCNA1P78396 AC007326.1-201ENST00000604539 458 ntBASIC16.79■□□□□ 0.28
CCNA1P78396 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC16.79■□□□□ 0.28
CCNA1P78396 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCNA1P78396 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.79■□□□□ 0.28
CCNA1P78396 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCNA1P78396 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CCNA1P78396 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.79■□□□□ 0.28
CCNA1P78396 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCNA1P78396 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCNA1P78396 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCNA1P78396 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCNA1P78396 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCNA1P78396 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCNA1P78396 AC112693.3-201ENST00000624819 1983 ntBASIC16.78■□□□□ 0.28
CCNA1P78396 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC16.78■□□□□ 0.28
CCNA1P78396 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCNA1P78396 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCNA1P78396 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCNA1P78396 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCNA1P78396 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCNA1P78396 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCNA1P78396 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.78■□□□□ 0.28
CCNA1P78396 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCNA1P78396 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCNA1P78396 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCNA1P78396 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCNA1P78396 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCNA1P78396 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCNA1P78396 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCNA1P78396 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCNA1P78396 SOD2-202ENST00000367054 815 ntTSL 2 BASIC16.78■□□□□ 0.28
CCNA1P78396 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCNA1P78396 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC16.78■□□□□ 0.28
CCNA1P78396 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC16.78■□□□□ 0.28
CCNA1P78396 RHEB-207ENST00000496004 744 ntTSL 2 BASIC16.78■□□□□ 0.28
CCNA1P78396 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
CCNA1P78396 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC16.78■□□□□ 0.28
CCNA1P78396 MIR4649-201ENST00000582839 64 ntBASIC16.78■□□□□ 0.28
CCNA1P78396 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCNA1P78396 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCNA1P78396 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCNA1P78396 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCNA1P78396 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.78■□□□□ 0.28
CCNA1P78396 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC16.78■□□□□ 0.28
CCNA1P78396 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCNA1P78396 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.78■□□□□ 0.28
CCNA1P78396 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CCNA1P78396 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.78■□□□□ 0.28
CCNA1P78396 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCNA1P78396 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCNA1P78396 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCNA1P78396 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCNA1P78396 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
CCNA1P78396 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CCNA1P78396 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCNA1P78396 AL136172.1-201ENST00000598590 1394 ntBASIC16.77■□□□□ 0.28
CCNA1P78396 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCNA1P78396 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC16.77■□□□□ 0.28
CCNA1P78396 AC013726.1-201ENST00000563747 2285 ntBASIC16.77■□□□□ 0.28
CCNA1P78396 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCNA1P78396 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.77■□□□□ 0.28
CCNA1P78396 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCNA1P78396 TMBIM7P-203ENST00000641617 1718 ntBASIC16.77■□□□□ 0.28
CCNA1P78396 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCNA1P78396 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCNA1P78396 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCNA1P78396 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCNA1P78396 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC16.77■□□□□ 0.28
CCNA1P78396 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCNA1P78396 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCNA1P78396 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCNA1P78396 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC16.77■□□□□ 0.28
CCNA1P78396 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC16.77■□□□□ 0.28
CCNA1P78396 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CCNA1P78396 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC16.77■□□□□ 0.28
CCNA1P78396 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC16.77■□□□□ 0.28
CCNA1P78396 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CCNA1P78396 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCNA1P78396 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.27
CCNA1P78396 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.27
CCNA1P78396 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCNA1P78396 KRT8P31-201ENST00000504812 1408 ntBASIC16.77■□□□□ 0.27
CCNA1P78396 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms