Protein–RNA interactions for Protein: P56750

CLDN17, Claudin-17, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN17P56750 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC13.35□□□□□ -0.27
CLDN17P56750 APRT-204ENST00000563655 709 ntTSL 5 BASIC13.35□□□□□ -0.27
CLDN17P56750 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.35□□□□□ -0.27
CLDN17P56750 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN17P56750 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC13.35□□□□□ -0.27
CLDN17P56750 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.35□□□□□ -0.27
CLDN17P56750 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN17P56750 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC13.35□□□□□ -0.27
CLDN17P56750 ECM1P1-201ENST00000604092 1279 ntBASIC13.35□□□□□ -0.27
CLDN17P56750 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.35□□□□□ -0.27
CLDN17P56750 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
CLDN17P56750 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN17P56750 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN17P56750 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.35□□□□□ -0.27
CLDN17P56750 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CLDN17P56750 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN17P56750 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN17P56750 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
CLDN17P56750 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC13.35□□□□□ -0.27
CLDN17P56750 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CLDN17P56750 CLUHP2-201ENST00000426660 1303 ntBASIC13.35□□□□□ -0.27
CLDN17P56750 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.35□□□□□ -0.27
CLDN17P56750 AC099063.4-201ENST00000641099 1602 ntBASIC13.35□□□□□ -0.27
CLDN17P56750 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
CLDN17P56750 AC232323.1-201ENST00000540724 2099 ntBASIC13.35□□□□□ -0.27
CLDN17P56750 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC13.35□□□□□ -0.27
CLDN17P56750 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN17P56750 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN17P56750 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
CLDN17P56750 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN17P56750 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN17P56750 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN17P56750 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN17P56750 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
CLDN17P56750 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.34□□□□□ -0.27
CLDN17P56750 LINC00552-201ENST00000625151 2579 ntBASIC13.34□□□□□ -0.27
CLDN17P56750 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN17P56750 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CLDN17P56750 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.34□□□□□ -0.27
CLDN17P56750 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN17P56750 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
CLDN17P56750 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN17P56750 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN17P56750 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN17P56750 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN17P56750 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
CLDN17P56750 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN17P56750 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.34□□□□□ -0.27
CLDN17P56750 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC13.34□□□□□ -0.27
CLDN17P56750 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.34□□□□□ -0.27
CLDN17P56750 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
CLDN17P56750 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN17P56750 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN17P56750 MXI1-205ENST00000393134 889 ntTSL 2 BASIC13.34□□□□□ -0.27
CLDN17P56750 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC13.34□□□□□ -0.27
CLDN17P56750 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC13.34□□□□□ -0.27
CLDN17P56750 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC13.34□□□□□ -0.27
CLDN17P56750 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC13.34□□□□□ -0.27
CLDN17P56750 AC007551.1-201ENST00000457394 519 ntBASIC13.34□□□□□ -0.27
CLDN17P56750 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC13.34□□□□□ -0.27
CLDN17P56750 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC13.34□□□□□ -0.27
CLDN17P56750 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.34□□□□□ -0.27
CLDN17P56750 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.34□□□□□ -0.27
CLDN17P56750 AC244669.2-201ENST00000612320 853 ntBASIC13.34□□□□□ -0.27
CLDN17P56750 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN17P56750 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.34□□□□□ -0.27
CLDN17P56750 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN17P56750 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN17P56750 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN17P56750 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CLDN17P56750 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CLDN17P56750 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN17P56750 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
CLDN17P56750 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN17P56750 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN17P56750 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN17P56750 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.34□□□□□ -0.27
CLDN17P56750 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN17P56750 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.34□□□□□ -0.27
CLDN17P56750 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CLDN17P56750 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN17P56750 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.34□□□□□ -0.27
CLDN17P56750 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CLDN17P56750 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
CLDN17P56750 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
CLDN17P56750 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
CLDN17P56750 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CLDN17P56750 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
CLDN17P56750 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
CLDN17P56750 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CLDN17P56750 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN17P56750 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.33□□□□□ -0.28
CLDN17P56750 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.28
CLDN17P56750 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.33□□□□□ -0.28
CLDN17P56750 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.33□□□□□ -0.28
CLDN17P56750 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN17P56750 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.33□□□□□ -0.28
CLDN17P56750 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.33□□□□□ -0.28
CLDN17P56750 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN17P56750 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms