Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC13.03□□□□□ -0.32
FOXG1P55316 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.03□□□□□ -0.32
FOXG1P55316 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC13.03□□□□□ -0.32
FOXG1P55316 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC13.03□□□□□ -0.32
FOXG1P55316 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC13.03□□□□□ -0.32
FOXG1P55316 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.03□□□□□ -0.32
FOXG1P55316 DERL2-202ENST00000570848 657 ntTSL 5 BASIC13.03□□□□□ -0.32
FOXG1P55316 AC104982.3-201ENST00000581995 514 ntBASIC13.03□□□□□ -0.32
FOXG1P55316 BX088702.1-201ENST00000610784 235 ntBASIC13.03□□□□□ -0.32
FOXG1P55316 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
FOXG1P55316 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC13.03□□□□□ -0.32
FOXG1P55316 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
FOXG1P55316 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
FOXG1P55316 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
FOXG1P55316 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
FOXG1P55316 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
FOXG1P55316 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
FOXG1P55316 AC006504.5-208ENST00000588784 2401 ntBASIC13.03□□□□□ -0.32
FOXG1P55316 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
FOXG1P55316 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.03□□□□□ -0.32
FOXG1P55316 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
FOXG1P55316 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.03□□□□□ -0.32
FOXG1P55316 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
FOXG1P55316 AC139749.1-202ENST00000617529 3139 ntBASIC13.03□□□□□ -0.32
FOXG1P55316 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
FOXG1P55316 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
FOXG1P55316 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
FOXG1P55316 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
FOXG1P55316 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.03□□□□□ -0.32
FOXG1P55316 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
FOXG1P55316 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
FOXG1P55316 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.03□□□□□ -0.32
FOXG1P55316 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC13.03□□□□□ -0.32
FOXG1P55316 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC13.03□□□□□ -0.32
FOXG1P55316 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
FOXG1P55316 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
FOXG1P55316 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
FOXG1P55316 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
FOXG1P55316 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
FOXG1P55316 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
FOXG1P55316 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
FOXG1P55316 SHC1P1-201ENST00000425230 1745 ntBASIC13.02□□□□□ -0.32
FOXG1P55316 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
FOXG1P55316 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
FOXG1P55316 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
FOXG1P55316 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
FOXG1P55316 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
FOXG1P55316 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
FOXG1P55316 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
FOXG1P55316 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
FOXG1P55316 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
FOXG1P55316 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.02□□□□□ -0.32
FOXG1P55316 AL354702.1-201ENST00000442006 1960 ntBASIC13.02□□□□□ -0.32
FOXG1P55316 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
FOXG1P55316 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
FOXG1P55316 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
FOXG1P55316 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
FOXG1P55316 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
FOXG1P55316 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
FOXG1P55316 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
FOXG1P55316 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC13.02□□□□□ -0.33
FOXG1P55316 AC104306.2-201ENST00000451877 341 ntBASIC13.02□□□□□ -0.33
FOXG1P55316 PACS1-203ENST00000524815 628 ntTSL 4 BASIC13.02□□□□□ -0.33
FOXG1P55316 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC13.02□□□□□ -0.33
FOXG1P55316 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC13.02□□□□□ -0.33
FOXG1P55316 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC13.02□□□□□ -0.33
FOXG1P55316 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC13.02□□□□□ -0.33
FOXG1P55316 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.02□□□□□ -0.33
FOXG1P55316 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.02□□□□□ -0.33
FOXG1P55316 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
FOXG1P55316 MRPL37P1-201ENST00000592451 1337 ntBASIC13.02□□□□□ -0.33
FOXG1P55316 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
FOXG1P55316 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
FOXG1P55316 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
FOXG1P55316 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
FOXG1P55316 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.02□□□□□ -0.33
FOXG1P55316 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
FOXG1P55316 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
FOXG1P55316 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
FOXG1P55316 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13.02□□□□□ -0.33
FOXG1P55316 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.33
FOXG1P55316 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
FOXG1P55316 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
FOXG1P55316 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC13.02□□□□□ -0.33
FOXG1P55316 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
FOXG1P55316 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
FOXG1P55316 AC092135.3-201ENST00000624151 1846 ntBASIC13.02□□□□□ -0.33
FOXG1P55316 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
FOXG1P55316 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.01□□□□□ -0.33
FOXG1P55316 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
FOXG1P55316 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
FOXG1P55316 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
FOXG1P55316 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
FOXG1P55316 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
FOXG1P55316 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
FOXG1P55316 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
FOXG1P55316 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
FOXG1P55316 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.01□□□□□ -0.33
FOXG1P55316 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.01□□□□□ -0.33
FOXG1P55316 AL513477.1-201ENST00000602865 2407 ntBASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms