Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDH4P55283 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH4P55283 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH4P55283 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CDH4P55283 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH4P55283 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDH4P55283 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.18■□□□□ 0.02
CDH4P55283 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH4P55283 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.18■□□□□ 0.02
CDH4P55283 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDH4P55283 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH4P55283 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH4P55283 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH4P55283 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CDH4P55283 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC15.18■□□□□ 0.02
CDH4P55283 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC15.18■□□□□ 0.02
CDH4P55283 HNRNPA1P63-201ENST00000427917 963 ntBASIC15.18■□□□□ 0.02
CDH4P55283 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
CDH4P55283 SKA2-202ENST00000437036 625 ntTSL 2 BASIC15.18■□□□□ 0.02
CDH4P55283 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDH4P55283 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDH4P55283 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC15.18■□□□□ 0.02
CDH4P55283 HNRNPA1P36-201ENST00000521313 955 ntBASIC15.18■□□□□ 0.02
CDH4P55283 CD74-212ENST00000524315 584 ntTSL 5 BASIC15.18■□□□□ 0.02
CDH4P55283 USB1-203ENST00000539737 1212 ntTSL 2 BASIC15.18■□□□□ 0.02
CDH4P55283 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC15.18■□□□□ 0.02
CDH4P55283 AC100827.2-201ENST00000563214 1194 ntBASIC15.18■□□□□ 0.02
CDH4P55283 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC15.18■□□□□ 0.02
CDH4P55283 MIR4783-201ENST00000580343 82 ntBASIC15.18■□□□□ 0.02
CDH4P55283 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC15.18■□□□□ 0.02
CDH4P55283 AL162426.1-201ENST00000624141 743 ntBASIC15.18■□□□□ 0.02
CDH4P55283 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDH4P55283 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.18■□□□□ 0.02
CDH4P55283 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
CDH4P55283 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH4P55283 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.18■□□□□ 0.02
CDH4P55283 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDH4P55283 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.18■□□□□ 0.02
CDH4P55283 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH4P55283 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDH4P55283 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDH4P55283 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH4P55283 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CDH4P55283 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH4P55283 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH4P55283 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC15.17■□□□□ 0.02
CDH4P55283 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDH4P55283 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH4P55283 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.17■□□□□ 0.02
CDH4P55283 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH4P55283 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.17■□□□□ 0.02
CDH4P55283 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CDH4P55283 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH4P55283 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDH4P55283 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.17■□□□□ 0.02
CDH4P55283 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.17■□□□□ 0.02
CDH4P55283 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.17■□□□□ 0.02
CDH4P55283 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH4P55283 AL590440.2-201ENST00000641973 1595 ntBASIC15.17■□□□□ 0.02
CDH4P55283 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDH4P55283 KRTAP10-13P-201ENST00000412914 571 ntBASIC15.17■□□□□ 0.02
CDH4P55283 PTPA-218ENST00000435132 618 ntTSL 2 BASIC15.17■□□□□ 0.02
CDH4P55283 FAM58BP-201ENST00000439056 645 ntBASIC15.17■□□□□ 0.02
CDH4P55283 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC15.17■□□□□ 0.02
CDH4P55283 AC104306.2-201ENST00000451877 341 ntBASIC15.17■□□□□ 0.02
CDH4P55283 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDH4P55283 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDH4P55283 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC15.17■□□□□ 0.02
CDH4P55283 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC15.17■□□□□ 0.02
CDH4P55283 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.17■□□□□ 0.02
CDH4P55283 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.17■□□□□ 0.02
CDH4P55283 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH4P55283 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
CDH4P55283 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDH4P55283 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDH4P55283 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CDH4P55283 MTHFR-210ENST00000641407 2387 ntBASIC15.17■□□□□ 0.02
CDH4P55283 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH4P55283 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH4P55283 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH4P55283 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CDH4P55283 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH4P55283 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH4P55283 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH4P55283 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH4P55283 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH4P55283 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH4P55283 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH4P55283 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
CDH4P55283 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
CDH4P55283 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH4P55283 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDH4P55283 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH4P55283 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.16■□□□□ 0.02
CDH4P55283 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH4P55283 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH4P55283 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC15.16■□□□□ 0.02
CDH4P55283 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH4P55283 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC15.16■□□□□ 0.02
CDH4P55283 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms