Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF140P52738 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC14.78□□□□□ -0.04
ZNF140P52738 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
ZNF140P52738 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
ZNF140P52738 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC14.78□□□□□ -0.04
ZNF140P52738 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC14.78□□□□□ -0.04
ZNF140P52738 AC008687.7-202ENST00000637404 953 ntBASIC14.78□□□□□ -0.04
ZNF140P52738 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF140P52738 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.78□□□□□ -0.04
ZNF140P52738 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF140P52738 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF140P52738 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
ZNF140P52738 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.78□□□□□ -0.04
ZNF140P52738 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.78□□□□□ -0.04
ZNF140P52738 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF140P52738 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.78□□□□□ -0.04
ZNF140P52738 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF140P52738 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF140P52738 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
ZNF140P52738 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF140P52738 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF140P52738 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF140P52738 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
ZNF140P52738 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
ZNF140P52738 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
ZNF140P52738 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ZNF140P52738 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.77□□□□□ -0.04
ZNF140P52738 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
ZNF140P52738 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC14.77□□□□□ -0.04
ZNF140P52738 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
ZNF140P52738 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ZNF140P52738 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
ZNF140P52738 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
ZNF140P52738 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ZNF140P52738 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.77□□□□□ -0.04
ZNF140P52738 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
ZNF140P52738 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC14.77□□□□□ -0.05
ZNF140P52738 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC14.77□□□□□ -0.05
ZNF140P52738 AL355994.2-201ENST00000447882 704 ntBASIC14.77□□□□□ -0.05
ZNF140P52738 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC14.77□□□□□ -0.05
ZNF140P52738 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
ZNF140P52738 GPR53P-205ENST00000457298 1084 ntBASIC14.77□□□□□ -0.05
ZNF140P52738 AC104989.1-201ENST00000519711 778 ntBASIC14.77□□□□□ -0.05
ZNF140P52738 HILS1-202ENST00000545329 423 ntBASIC14.77□□□□□ -0.05
ZNF140P52738 AC079316.1-201ENST00000548397 411 ntBASIC14.77□□□□□ -0.05
ZNF140P52738 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC14.77□□□□□ -0.05
ZNF140P52738 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC14.77□□□□□ -0.05
ZNF140P52738 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
ZNF140P52738 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ZNF140P52738 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ZNF140P52738 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.77□□□□□ -0.05
ZNF140P52738 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ZNF140P52738 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ZNF140P52738 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.77□□□□□ -0.05
ZNF140P52738 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
ZNF140P52738 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ZNF140P52738 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
ZNF140P52738 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.05
ZNF140P52738 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
ZNF140P52738 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC14.76□□□□□ -0.05
ZNF140P52738 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF140P52738 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF140P52738 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF140P52738 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF140P52738 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF140P52738 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.76□□□□□ -0.05
ZNF140P52738 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF140P52738 KRT8P28-201ENST00000433288 1390 ntBASIC14.76□□□□□ -0.05
ZNF140P52738 AC215219.1-201ENST00000400706 1817 ntBASIC14.76□□□□□ -0.05
ZNF140P52738 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF140P52738 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF140P52738 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF140P52738 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
ZNF140P52738 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF140P52738 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF140P52738 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF140P52738 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
ZNF140P52738 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
ZNF140P52738 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF140P52738 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF140P52738 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF140P52738 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF140P52738 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
ZNF140P52738 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC14.76□□□□□ -0.05
ZNF140P52738 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC14.76□□□□□ -0.05
ZNF140P52738 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF140P52738 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC14.76□□□□□ -0.05
ZNF140P52738 AC119751.2-201ENST00000504529 210 ntBASIC14.76□□□□□ -0.05
ZNF140P52738 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC14.76□□□□□ -0.05
ZNF140P52738 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
ZNF140P52738 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC14.76□□□□□ -0.05
ZNF140P52738 AP006547.1-201ENST00000563435 692 ntBASIC14.76□□□□□ -0.05
ZNF140P52738 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC14.76□□□□□ -0.05
ZNF140P52738 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.76□□□□□ -0.05
ZNF140P52738 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF140P52738 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
ZNF140P52738 MIR6775-201ENST00000617557 69 ntBASIC14.76□□□□□ -0.05
ZNF140P52738 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.76□□□□□ -0.05
ZNF140P52738 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF140P52738 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms